Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5425 ATGGCGTTAAGTTTGGCGTTAAGTTTGACTCACCAACCCGCCACAAAAACCGTGCTCCAAACACCCTCCTCCTTCATCACCTCTCGCCCTCTGCCACCGCCTCAATGCCTCCCTTCCCGGAACCCGCAGCGGCGATCACTCGCCGTGTGTGCCTCCTCCGCCGCCGCCGTGAAGTCGGTCAAGGCGAGGCAGATCGTGGACAGCAGGGGGAATCCGACGGTTGAGGTGGATCTGGTGACCGACCAGCTTTTCCGATCGGCGGTTCCCAGTGGTGCCTCCACCGGGATTTACGAGGCGCTTGAGCTCAGAGATGGGGACAAGAGTGTCTATGGCGGGAAAGGAGTTCTTCAGGCCGTTCGGAATATCAATGAGGTCTTGGCCCCCAAACTTGTTGGTGTCGACGTTAGGAATCAAGCTGATGTGGATGCTATTATGCTGGAAATTGATGGAACTCCTAACAAGTCAAAACTAGGGGCTAATGCAATACTGGGAGTTTCACTGAGTGTATGTAGAGCTGGTGCAGGGGCAAAGGGAGTGCCATTGTACAAGCACATCCAGGAGATTTCAGGAACGAAGGAACTTGTAATGCCGGTTCCAGCTTTTAATGTTATAAATGGGGGAAGTCATGCTGGAAATAACCTGGCTATGCAAGAATTCATGATACTACCAGTTGGAGCAACTTCATTTGCTGAGGCTTTCCGCATGGGCAGTGAAGTTTATCATGTATTAAAGGGCATAATCAAGGCAAAATATGGACAAGATGCATGTAATGTTGGAGACGAAGGAGGATTCGCCCCCAATGTTCAGGATAACAGGGAGGGGCTGGTTTTACTCATTGATGCCATTGAGAAGGCTGGTTATACTGGCAAGATTAAAATAGGTATGGATGTTGCAGCTTCAGAGTTTTACACTAAGGATAGGAAATATGATTTGAACTTCAAGAAACAGCCAAATGATGGAGCTCATGTTCACTCTGCTGAGAGTCTTGGTCAACTTTACCAAGACTTTGTGAAAGAATTTCCCATTGTATCAATTGAGGATCCGTTTGATCAAGATGATTGGGGATCATGGTCTTCTCTACTCTCTTCAGTTGATATTCAACTTGTGGGAGACGATTTGCTAGTTACGAATCCAAAGAGAATAGCTGAAGGGATCCAGAAGAAGGCTTGCAATGCTTTGCTTCTAAAGGTTAACCAGATTGGCACAGTGACTGAGTCTATTCAGGCTGCACTTGACTCAAAGACTGCAGGTTGGGGTGTCATGGTTAGTCATCGGAGTGGCGAGACTGAGGATAACTTCATTGCTGATCTCTCTGTGGGCTTGGCTAGCGGACAGATAAAGACTGGTGCTCCTTGCCGGAGTGAGCGGTTGGCAAAATATAATCAGCTTCTTCGGATTGAAGAGGAACTTGGAAGTGTACGATATGCTGGTGAAGCTTTCAGATCACCTTAG 1452 0.4807 MALSLALSLTHQPATKTVLQTPSSFITSRPLPPPQCLPSRNPQRRSLAVCASSAAAVKSVKARQIVDSRGNPTVEVDLVTDQLFRSAVPSGASTGIYEALELRDGDKSVYGGKGVLQAVRNINEVLAPKLVGVDVRNQADVDAIMLEIDGTPNKSKLGANAILGVSLSVCRAGAGAKGVPLYKHIQEISGTKELVMPVPAFNVINGGSHAGNNLAMQEFMILPVGATSFAEAFRMGSEVYHVLKGIIKAKYGQDACNVGDEGGFAPNVQDNREGLVLLIDAIEKAGYTGKIKIGMDVAASEFYTKDRKYDLNFKKQPNDGAHVHSAESLGQLYQDFVKEFPIVSIEDPFDQDDWGSWSSLLSSVDIQLVGDDLLVTNPKRIAEGIQKKACNALLLKVNQIGTVTESIQAALDSKTAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGSVRYAGEAFRSP* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5425 483 CDD enolase 59 469 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 Gene3D - 179 483 IPR036849 -
Lja1g5425 483 SFLD Enolase 57 470 - -
Lja1g5425 483 Hamap Enolase [eno]. 55 470 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 SUPERFAMILY Enolase N-terminal domain-like 57 188 IPR029017 -
Lja1g5425 483 Gene3D - 50 178 IPR029017 -
Lja1g5425 483 MobiDBLite consensus disorder prediction 21 43 - -
Lja1g5425 483 SUPERFAMILY Enolase C-terminal domain-like 193 473 IPR036849 -
Lja1g5425 483 Pfam Enolase, N-terminal domain 57 185 IPR020811 -
Lja1g5425 483 PANTHER ENOLASE 48 483 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 TIGRFAM eno: phosphopyruvate hydratase 58 479 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 SFLD enolase 57 470 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 Pfam Enolase, C-terminal TIM barrel domain 194 481 IPR020810 -
Lja1g5425 483 PANTHER ENOLASE 1, CHLOROPLASTIC 48 483 - -
Lja1g5425 483 ProSitePatterns Enolase signature. 393 406 IPR020809 -
Lja1g5425 483 SMART Enolase_C_3 193 483 IPR020810 -
Lja1g5425 483 SMART Enolase_N_3 57 185 IPR020811 -
Lja1g5425 483 PRINTS Enolase signature 370 381 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 PRINTS Enolase signature 88 102 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 PRINTS Enolase signature 158 174 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 PRINTS Enolase signature 215 228 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 PRINTS Enolase signature 393 407 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Lja1g5425 483 PRINTS Enolase signature 422 439 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5425 Lja-Chr1 91767944 91771883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5425 K01689 - gmx:100787451 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5425 1 91767944 91771883 Lja1g5425 1 91767944 91771883 ECH