Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5423 ATGGCTTGCAAATCGCTATGCTCCATCACTGTGTCTGATATTGAATCCCTTGGAATTTCACGAGACGCTGCTTCTACTTTTCACCAGCGTCTCACAGAAATCATTGGAGTTCATGGAGCTGGGTCCCCTGCCACGTGGCAGAACATCGCAAGCAGCATCCTCAACAACCCTGAACTCCCTTTCTCCTTTCATCAGATGCTCTACTATGGTTGCTTCAAGGATTATGGACCCGACCCACCCGCTTGGATACCCGACCCGAAAAGTGCTGCTTTGACAAATGTTGGCCGGTTGCTAGAGAGGAGGGGTAAAGAGTTTCTCGGCTCAGCATATAAGGACCCAATTACAAGCTTTTCTGATTTCCAGAAATTTTCAGTATCAAACCCGGAGGTTTATTGGGAAACTGTGTTTGAGGAAATGAATATATCTTTTTCCAAACCACCTGAATGCATCTTACGTGATAACCTCCCTGGGGAAGACAGATCATCACTCCCAAGTGGTCAATGGCTTCCTGGAGCATCTATTAATCCAGCACAGAACTGCTTAAATGTAAATGGCAACAGAAGTTTGAATGACACAGTAATAATATGGCGTGATGAACTGCATGATGATCTCCCTCTACAAAGGATGACACTTCAGGAACTGCGTCAAGAGATCTGGTTAGTTGCTTATGCTCTCGAATCACTGGGTTTGGAGAAAGGATCTGCAATTGCGATTGATATGCCAATGAATTGCAAAGCCGTGGTTATCTACCTAGCTATCATTCTTGCAGGTTATGTTGTTGTATCCATTGCTGACAGTTTTGCAGCACGTGAAATATCAACCAGACTTAGAATATCAAATGCAAAAGTCATATTTACTCAGGATATCATTATTCGTGGAGACAAAAGCCTTCCTCTTTACAGTAGAATTTTGGAGGCACAGGCTCCTATGGCAGTAGTTATCCCTGCCAGAGGCTCTGGATCAAGCATGAAACTGCGCAGTGGGGACCATTCGTGGTGTGGGTTTCTGGAGGGAGTCAATAGTGTTAAAGGCAAGGAATTCATACCTGCAGAACAACCAGTTGAAACTTTTACAAACATTCTCTTTTCTTCTGGGACAACAGGTGATCCAAAGGCAATTCCATGGACCAATATTACTGCTTTAAAAGCTGCTGCAGATGCGTGGTGCCACTTTGACATTCGTAAAGGGGATATAGTTTGCTGGCCCACTAATCTTGGATGGATGATGGGGCCATGGTTAGTATTTGCGTCATTGCTAAATGGAGCTTCAATGGCATTGTATAATGGATCCCCTCTTGGGCCTGGCTTTGCCAAGTTTGTACAGGATGCTAAGGTAACAATGCTTGGTTTGGTTCCAAGTCTTGTACGGAGTTGGAAAAATGCAAATTCCACATCTGGCTATGACTGGTCATCTATCCGATGCTTTGGATCCAGTGGAGAAGCATCTAGTGTAGATGAATACCTTTGGCTGATGGGGAGAGCTCATTACAAGCCTGTCATTGAATACTGTGGTGGTACAGAGATTGGGGGTGGATTTATTACTGGATCATTACTACAGGCTCAGTCCTTGGCTGCTTTTAGCACACCTGCTATGGGCTGTGAATTGTTTATTCTTGATGATGATGGCCATCCTCTTCCAGACAATGTTGCAGGGATAGGTGAATTGGCTCTAGGTTCCCTCATGTTGGGAGCGTCAAATACGCTGCTGAATGCTGATCATTATGATGTATATTTTAAGGGAATGCCTCTCTGGAATGGAAAGGTTTTACGGAGGCATGGAGATATACTGGAGCGTACCGTTAGAGGATACTATCATGCACATGGTCGTGCAGATGATACGATGAACCTTGGAGGTATCAAGGTGAGTTCGGTTGAGATTGAACGCGTATGCAATGGAGTAGGTAGCAATATCCTGGAAACTGCTGCAATAGGGGTACCACCTTCTGGAGGTGGGCCTGAGCAACTGGTCATTGCTGTTGTATTGAAGAATTCAAGCAGTACAGCAGAAGATTTACATAAATTAAGGATCTCTTTTAACTCAGCTCTCCAGAAATCACTGAATCCATTGTTCAAGGTTTCTCAAGTAGTGTCAGTGCCATCTCTTCCAAGGACGGCATCAAACAAGGTTATGAGAAGGGTTTTGCGGCAGCAACTTGCCGAACATAGGCAGATGTCTAAAATATAA 2184 0.4441 MACKSLCSITVSDIESLGISRDAASTFHQRLTEIIGVHGAGSPATWQNIASSILNNPELPFSFHQMLYYGCFKDYGPDPPAWIPDPKSAALTNVGRLLERRGKEFLGSAYKDPITSFSDFQKFSVSNPEVYWETVFEEMNISFSKPPECILRDNLPGEDRSSLPSGQWLPGASINPAQNCLNVNGNRSLNDTVIIWRDELHDDLPLQRMTLQELRQEIWLVAYALESLGLEKGSAIAIDMPMNCKAVVIYLAIILAGYVVVSIADSFAAREISTRLRISNAKVIFTQDIIIRGDKSLPLYSRILEAQAPMAVVIPARGSGSSMKLRSGDHSWCGFLEGVNSVKGKEFIPAEQPVETFTNILFSSGTTGDPKAIPWTNITALKAAADAWCHFDIRKGDIVCWPTNLGWMMGPWLVFASLLNGASMALYNGSPLGPGFAKFVQDAKVTMLGLVPSLVRSWKNANSTSGYDWSSIRCFGSSGEASSVDEYLWLMGRAHYKPVIEYCGGTEIGGGFITGSLLQAQSLAAFSTPAMGCELFILDDDGHPLPDNVAGIGELALGSLMLGASNTLLNADHYDVYFKGMPLWNGKVLRRHGDILERTVRGYYHAHGRADDTMNLGGIKVSSVEIERVCNGVGSNILETAAIGVPPSGGGPEQLVIAVVLKNSSSTAEDLHKLRISFNSALQKSLNPLFKVSQVVSVPSLPRTASNKVMRRVLRQQLAEHRQMSKI* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5423 727 Pfam AMP-binding enzyme 205 616 IPR000873 -
Lja1g5423 727 Gene3D - 103 611 IPR042099 -
Lja1g5423 727 SUPERFAMILY Acetyl-CoA synthetase-like 119 720 - -
Lja1g5423 727 Gene3D - 612 727 IPR045851 -
Lja1g5423 727 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 726 - -
Lja1g5423 727 ProSitePatterns Putative AMP-binding domain signature. 360 371 IPR020845 -
Lja1g5423 727 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5423 Lja-Chr1 91736602 91746830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5423 1 604 Acyl Lipid Metabolism Gene Families AT5G23050 65.950 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5423 - - gmx:100779628 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5423 1 91736602 91746830 Lja1g5423 1 91736602 91746830 ECH