Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5415 ATGCCGGTTTCAACTCGATCCAAGATTTTGAACCCACAAGAACAACCCCAACAACAATGCTTAAAGGAGAAACTGAAAGCCCTGACTCAGTTGTACGAGCACCACAAGCAAAACCTCGCTCCTTCAGCTCCGGTAGCGGCGGCGGCGCGGAAGCTTGCGTTGCCGCCGGAAAGTGGGAGCAGGATTCTTGTGTTTGTGAGGGTGAGGCCAATGGGGAAGAAGGAAAAGGAAGCGGGTACGAGGTGCTGTGTGAGGATCGCGGATCGCCGTGACGTTTATATTACAGAGTTTTCCACTGCGAATGATTACCTGAGGTTGAAGAGGGTTCGGGGACGCCATTTCACGTTTGATGCTTCATTTCCAGATTCGGCTACTCAGAACCAGGTTTATTCCACCACAACTTCAGAACTTGTGGAAGCAGTTCTGCAAGGGAGAAATGGATCAGTTTTCTGTTATGGTGCCACTGGAGCTGGGAAAACTTACACAATGCTTGGTACATTGGAGAGCCCAGGGGTGATGGTGTTGGCAATTAAGGATCTTTTCAGTAAAATCAGGCAGAGAAGTTGTGATGGAAACCATGCCGTTCATCTGTCTTACCTTGAGGTTTATAATGAAACTGTGAGAGATTTGCTTTCACCTGGAAGACCTCTGGTTCTTAGAGAAGATAAACAGGGGATTGTGGCAGCAGGTCTTACACAATACAGAGCCTACTCCACTGATGAAGTGATGTCATTGCTTCAAGAAGGAAATAAGAATAGAACCACAGAACCAACTCGTGCAAATGAAACTTCTTCACGTTCCCATGCTATTTTGCAGGTTGTGGTTGAATATCGAGTTAGAGATGCTGCAATGAATATTATTAACCGAGTGGGCAAGCTTTCATTGATTGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACAGATCAAAGAACACTTAGGTCTCTGGAGGGTGCCAATATAAACCGGTCTCTTCTTGCACTAAGCAGCTGCATTAATGCTCTTGTAGAGGGCAAGAAGCATATACCATATCGCAATTCAAAACTTACTCAACTTCTCAAAGATTCATTGGGAGGAGTTTGCAACACTGTTATGATTGCAAACATAAGCCCAAGTAACCTCTCATTTGGTGAAACTCAGAACACCCTTCATTGGGCTGATAGAGCCAAGGAGATTCGAACTAAGGCAACTGATGCAAATGAAGATCTAATTCCAATACCTGAGACAGAAACAGACCAGGCCAAGCTGGTACTTGAGCTGCAAAAGGAGAATCGTGAAATGCGAATACAACTAGCAAGACAGCAAAAGAAGCTTTTGACACTCCAAGCACAGTCCTTGGCTGCAAACTCCCCAACACCACCTTCAGCTACATCCTTTCTTTCCACTCCTCCGACTTCTGCCCAACCAAATGAAAAGCGAATGACCAGAATTTCTTTCTTAGGTGCAAGCCATTTCACTCCAGAGACTAAGAACAAGGGAGATGAGGTAGCTGTCACTGTCAGAATACTGCAACAAAAAGTAAAAGTCCTTGAGGCAGAAATAGGGAGAATGAAAAAGGACCATAGCTTGCAGATAAAGCAGAAAGATGATGTTATTCGCGAGCTTTCATTGAAGGGTGTGAAAAAATTAGCAGCTGTAGGGGAAGTGGGGAAGAGAGTGGTAACAAGGTCTAGCATAAGGCCAAAGGAGTCAAACACTGGTGAGTTGAAGAGTCCAAATCATCGGTTTCAATCACCAGTACCAGCTGCCAAGAAACGAAGCTTTTGGGACATAACTGCTGCTAACAGCCCATCAGTTACTTCAGTGAATGGGAGAAAAACTAGAAGTCATGTCATTTCTGAACCTACTGCACATCCATCCATGCTTCTTCAGCCAGGATTTGCTCGTCAAAAGGGAAATATTTAA 1902 0.4501 MPVSTRSKILNPQEQPQQQCLKEKLKALTQLYEHHKQNLAPSAPVAAAARKLALPPESGSRILVFVRVRPMGKKEKEAGTRCCVRIADRRDVYITEFSTANDYLRLKRVRGRHFTFDASFPDSATQNQVYSTTTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTLESPGVMVLAIKDLFSKIRQRSCDGNHAVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMSLLQEGNKNRTTEPTRANETSSRSHAILQVVVEYRVRDAAMNIINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGVCNTVMIANISPSNLSFGETQNTLHWADRAKEIRTKATDANEDLIPIPETETDQAKLVLELQKENREMRIQLARQQKKLLTLQAQSLAANSPTPPSATSFLSTPPTSAQPNEKRMTRISFLGASHFTPETKNKGDEVAVTVRILQQKVKVLEAEIGRMKKDHSLQIKQKDDVIRELSLKGVKKLAAVGEVGKRVVTRSSIRPKESNTGELKSPNHRFQSPVPAAKKRSFWDITAANSPSVTSVNGRKTRSHVISEPTAHPSMLLQPGFARQKGNI* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5415 633 MobiDBLite consensus disorder prediction 446 470 - -
Lja1g5415 633 SMART kinesin_4 59 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g5415 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 435 IPR027417 -
Lja1g5415 633 MobiDBLite consensus disorder prediction 560 581 - -
Lja1g5415 633 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lja1g5415 633 Pfam Kinesin motor domain 67 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g5415 633 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g5415 633 PRINTS Kinesin heavy chain signature 144 165 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g5415 633 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g5415 633 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g5415 633 Coils Coil 416 443 - -
Lja1g5415 633 ProSiteProfiles Kinesin motor domain profile. 61 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja1g5415 633 PANTHER KINESIN-LIKE PROTEIN 47 626 - -
Lja1g5415 633 PANTHER KINESIN-RELATED 47 626 IPR027640 GO:0003777|GO:0007018
Lja1g5415 633 Gene3D Kinesin motor domain 56 397 IPR036961 -
Lja1g5415 633 Coils Coil 18 38 - -
Lja1g5415 633 MobiDBLite consensus disorder prediction 613 633 - -
Lja1g5415 633 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5415 Lja-Chr1 91326686 91331440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5415 62 438 Miscellaneous Gene Families AT2G21380 36.316 8.35e-59 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5415 K10401 - gmx:100815524 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5415 1 91326686 91331440 Lja1g5415 1 91326686 91331440 ECH