Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5401 ATGGATGTGAAGAAAATTGTGGTGGTAGTAGAAGATGTAGATGCAGCTAGAACTGCTCTACAATGGGCTCTTAGAAATGTCATTCGCCATGGTGACACAATCACTTTGCTCCATGTCTACCACTCCACAAGATCAAGAAGCAGAAGCAGAGCTCGTCTTCTTCGCCTCAACGGCTTCCGGTTAGCCCTTTCCTTTCAAGAGATGTGCAGCAACTACCCCAACACAAAGGTTGAGATCATTGTCACGGAAGGGGACCAAGAAGGAACCAAGGTTGCTGCTACGGTCCAAGAGATTGGAGCTTCAATGCTTGTGGTTGGACTCCATGATCACAGTTTTCTTTACAAATTCGCCATGGCCCATTCCCATAAAAGTATAGCCAGCAACTTCAACTGCAGAGTACTTGCCATCAAGCACCCTCATTCTGACCACATGATTTCTTCTGCAGTAGCTGTTTTAGACAGTTCAACCAACATGGACTTTTCACAAATTGACATTTCTCAATTACAAGTCCCTCATATCACTCCACCAAAAATTCCGTACCGAATCTGCCCTATTCCGTCTGCAATTATTTGGAGATCAAGGAGAACTAGGAGAAGATGA 600 0.4467 MDVKKIVVVVEDVDAARTALQWALRNVIRHGDTITLLHVYHSTRSRSRSRARLLRLNGFRLALSFQEMCSNYPNTKVEIIVTEGDQEGTKVAATVQEIGASMLVVGLHDHSFLYKFAMAHSHKSIASNFNCRVLAIKHPHSDHMISSAVAVLDSSTNMDFSQIDISQLQVPHITPPKIPYRICPIPSAIIWRSRRTRRR* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5401 199 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 139 - -
Lja1g5401 199 CDD USP_Like 15 116 - -
Lja1g5401 199 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 199 - -
Lja1g5401 199 Gene3D HUPs 2 148 IPR014729 -
Lja1g5401 199 Pfam Universal stress protein family 4 137 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5401 Lja-Chr1 90749442 90751843 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5401 - - gmx:100817650 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5401 1 90749442 90751843 Lja1g5401 1 90749442 90751843 ECH