Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5326 ATGGCACAGCTGAGTGTGGGTCTGGGAGGAATGTCTGCATACAAATTCCAACTTCACATCCCTTTCTATTCCTCCTTCTCTTCCATTTCCATTCCCATTCCCCCCTTCAACATCAAACCCTTTACTCGCACTGCCCTTCGTCATTCTCATCATTCCCTCTCCCTGCTCCGTTTCCGCTCTCCCACTCATTGCAGCAAAATCAAGAACTCAGATTTGGTGCCGCAGCTGGAACTTGGGAAGCCAGAAAACAAAAGGAAACCCGAGAAGCGAGCCAGCGGAATATTCTGGGTCATACTCCTCAACATCGGGATATTTGTGGCTGACAAATTTTTTCAGGTTAATGGCATTAAGGCTATGTACCTGTACCACAACCGGCCTTCTTGGTACCAGTTTGTCACGGCAACATTTTGCCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTGTTACATTCTTACTGGTGTTGGAGCAAATCTTGTTTCCTGGTTGATTTTACCAAGAGATATAGTCTCTGTTGGAGCTTCTGGTGCTGTTTTTGGGCTATTTACTATTAGTGTCCTTGTAAAGATGTCCTGGGATTGGAGGAAGATACTTGAGGTGCTTATATTGGGTCAGTTTGTTGTAGAGAAGGTCATGGAAGCAGCTCAAGCTTCAACATCATTAACCGGAACCTTTCGCGGAGGCTACTCATTGCAAAGTGTCAATCATATTGCACATCTTTCTGGTGCCCTTGTTGGTGTGCTTTTGGTTTGGCTCCTTAGCAAGGTTCCTTCCGATCCTTCTGACCAATAA 855 0.4468 MAQLSVGLGGMSAYKFQLHIPFYSSFSSISIPIPPFNIKPFTRTALRHSHHSLSLLRFRSPTHCSKIKNSDLVPQLELGKPENKRKPEKRASGIFWVILLNIGIFVADKFFQVNGIKAMYLYHNRPSWYQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLCYILTGVGANLVSWLILPRDIVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVVEKVMEAAQASTSLTGTFRGGYSLQSVNHIAHLSGALVGVLLVWLLSKVPSDPSDQ* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5326 284 SUPERFAMILY Rhomboid-like 93 278 IPR035952 -
Lja1g5326 284 Pfam Rhomboid family 125 276 IPR022764 GO:0004252|GO:0016021
Lja1g5326 284 Gene3D - 88 279 IPR035952 -
Lja1g5326 284 PANTHER RHOMBOID-RELATED PROTEIN 53 283 - -
Lja1g5326 284 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 53 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5326 Lja-Chr1 85059616 85063815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5326 - - adu:107495220 387.882