Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5296 ATGGGTGGAGTTACCTCATCCATGGCTGCAAAATTGGCCTTCTTCCCTCCGAACCCGCCGTCGTACAAGCTCGTGAAGGAAGAAGCAACGGAGCTGTTGCTCATGGACGCGTTCCCGCACCGTGAAAACGTTGAAGTTCTCAAGTTCCCCAACCGCCGCGGCACCGAGATCGTCGCCGTCTATGTTCGCCACCCGATGGCCAAATCAACCATCCTTTACTCCCATGGAAATGCCGCTGACATTGGCCAGATGTACGAGCTCTTCGTTGAGCTCAGCATCCACTTGCGTGTTAATCTCATGGGATACGATTACTCTGGCTATGGACAGTCATCAGGGAAGCCAAGTGAGCATAATACTTACGCTGACATTGAAGCTGTATATAAGTATCTTGAAGAGAACTATGGTGCCAAACAGGAAGACATAATCCTTTACGGTCAATCTGTTGGAAGTGGTCCTACTTTAGATCTTGCTGCCCGGTTACCCCGACTTAGGGCTGTTGTTCTCCATAGTCCTATACTATCAGGGTTGAGAGTCATGTACCCTGTAAAAAGGTCTTACTGGTTTGACATTTATAAGAACATTGATAAAATTCCATTGGTGAAGTGTCCAGTGCTAGTAATTCATGGTACTGCTGATGAGGTTGTTGATTGCTCTCATGGTAAGCAGTTATGGGAGCTATGTCAACAGAAATATGAACCTTTATGGATCAAAGGAGGAAACCACTGTAATTTGGAGCTCTATCCAGAATACCTTCGACATCTCAGAAAATTCATATCAACAGTAGAAAAGTCACCATCCCAAAGAGTGAGTTTTAGGAGAAGCGTAGATAGAGTTGAACAATCCAGAGGAAGCACTGATTGCTTTGAAACACCTAGGAAGAGTACTGAAAAGAGGGACAAACCAAGGAAAAGCACCGAGAGGATAGAGAAACTGAAATTTCATGAATACAAATTCAACAATGCCGAAAAATTAGAGAAGTTAAGAGTCCAATTTGACCAAACGGAGAGGTCGCGAAGAAGCGTGGAGTATAGTGATAAATCCAGAAGCATTGAGTTCCAAGATAAATCTAGGAGAAGTGTTGATGTTCAGTTTGAGAGGCCTCGGAAGAGCATTGATTGGCTGGACAGAATTCGAGCTAGCTGA 1143 0.4471 MGGVTSSMAAKLAFFPPNPPSYKLVKEEATELLLMDAFPHRENVEVLKFPNRRGTEIVAVYVRHPMAKSTILYSHGNAADIGQMYELFVELSIHLRVNLMGYDYSGYGQSSGKPSEHNTYADIEAVYKYLEENYGAKQEDIILYGQSVGSGPTLDLAARLPRLRAVVLHSPILSGLRVMYPVKRSYWFDIYKNIDKIPLVKCPVLVIHGTADEVVDCSHGKQLWELCQQKYEPLWIKGGNHCNLELYPEYLRHLRKFISTVEKSPSQRVSFRRSVDRVEQSRGSTDCFETPRKSTEKRDKPRKSTERIEKLKFHEYKFNNAEKLEKLRVQFDQTERSRRSVEYSDKSRSIEFQDKSRRSVDVQFERPRKSIDWLDRIRAS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5296 380 MobiDBLite consensus disorder prediction 289 304 - -
Lja1g5296 380 Pfam Serine aminopeptidase, S33 67 174 IPR022742 -
Lja1g5296 380 Gene3D alpha/beta hydrolase 40 260 IPR029058 -
Lja1g5296 380 MobiDBLite consensus disorder prediction 282 304 - -
Lja1g5296 380 SUPERFAMILY alpha/beta-Hydrolases 19 262 IPR029058 -
Lja1g5296 380 PANTHER ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 1 319 - -
Lja1g5296 380 PANTHER ALPHA/BETA-HYDROLASE SUPERFAMILY PROTEIN 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5296 Lja-Chr1 81145511 81149199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5296 K01076 - gmx:100813072 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5296 1 81145511 81149199 Lja4g2356 4 26068791 26072194 ECH
Lja1g5296 1 81145511 81149199 Lja1g5296 1 81145511 81149199 ECH