Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5290 ATGGCGGAAGAGAGCAATCGCATTCGCAGCGTGAGACTGCTATGCCGCCACCCAAAGCATCTCAACAAAGGATCCGACCCGGGAACCCACTATTGGCTTATCGGATCCCCATTCTTACCGCCACTCACCATCGTCTCCATCCTCCGATCCTCTTCTTCTTCCCCAGATTTACGCAAGGAATCCGAGGACCTTCAAACCTTCATTCCCAAAGGCTTTGAAGTCATCGGAGCCCTTGCCTCCGGCGACGCCACCGATGCCCGTGCTGCCATCGACGCTGCCCGTGGATTGAGGAAGCTCCTTTACGGCGGAGGAGGAGGAGGAGCGGGGGAAGACCAACCGCTGATCGGAGCGGTTTCGGGGCCGGATTCCGGTGAACTGCGGTTTTTTGTGTCTGAGGGTGGAAATGCGACTAGCCTTGAACCTGTTACGTCTGTGGTACATGAACAGCACCCGGAGAAGCTTGTGTGGGAGAATGGTTGCTTGCTTCGTTGTGAGCTTCCGATTAAGTTGCCACTATATTACCCTCTCAACAATCCAACTGATATTGAGAAAGCATATGTACGGGCAACGGAAGCTGTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACTTATTAGAAACGTTTAACAAAACCTCTCCAGATCTACCTCCACCTGCCATAATTCGAGGTGTACAATTAGACTTTTGTGCAGACCTCTCCAAGATCAGGCCTTTAACTAAGGGTGATGATGGCTTTGATGCAAGCTCACTGTTGTGTTCGTACTTTTCCAACAAAAGTAAAGCAGGCTCAGAGGTTTTTTCCGTAGAGAATGCAGATACCATCCATGTTGGTGTTCTTTTTAGTAGCGTAGGGCCATCATCAGCATTTGCACCTGTTGCAGAATATCTTCCAGCCCAGGAAGAAGCTAGCCTCCTTGTTGTGGATATTAAGCTAGACGTACTCTGCTATTCTTCTTGGAATCTTCCATTGAGATATGCAGTATCTAGTTTAATCATCCCTGGCTTAATTGACCAGTTAAATAACCTGCAGACGTCGATGTTGCCTAACCTTTTGGCACAACATCCTCAGCTAAAATGTTATCACTTTAGTCCTCCTGGGATTCTGCATCCAGTAACTGTTTTCTATGAACTGAGTTTTGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTGCACTCAAGGTTGGGACTACCTTATGATCGTCCCCTTCTAAGAATTGCTAATGCCCTGGATTTCTCAAAATTGAAAAACAGTGGTATTGTCTCTCTACAGAAAGGTTCAGCTTTGCTAAGAGATGTACACATTGGGATTCCAAGCAGTGGGATTACTGGGGGAACCGTTTCCCTTGTTCAAGGTTCCTATGAATACTTTCATTATCTTCAGGAAGGATATAATGATTCGGGATGGGGTTGTGCGTATCGCTCTCTCCAGACTATCATTTCATGGTTCAGACTCCAAAACTACTCATCCATAGAGGTTCCTTCTCATAGAGAAATACAGCAGGCACTTGTTGAGATAGGTGATAAAGATCCTTCTTTTATTGGGTCACGAGAATGGATTGGGGCCATCGAGTTGAGCTTTGTTTTGGATAAACTTCTGGGTGTTACTTGCAAAGTCATCAATGTTAGATCTGGAGCCGAGCTTCCTGAAAAATGTCGGGAGCTAGCGTTGCACTTTGAGAGCCAGGGTACACCTGTTATGATTGGTGGTGGTGTCCTCGCGTATACACTCTTGGGGGTGGATTACAATGAAGCAAGTGGTGATTGCGCGTTTTTAATACTTGATCCTCACTATACTGGCGTGGAGGATCTGAAGAAAATAATCAATGGGGGATGGTGTGGATGGAAAAAGGCTGTTGATAACAAGGGAAAGAATTTCTTCTTGCACGATAAGTTTTATAATCTACTGCTGCCTCAGAGGCCCAGCATGGTTTGA 1944 0.464 MAEESNRIRSVRLLCRHPKHLNKGSDPGTHYWLIGSPFLPPLTIVSILRSSSSSPDLRKESEDLQTFIPKGFEVIGALASGDATDARAAIDAARGLRKLLYGGGGGGAGEDQPLIGAVSGPDSGELRFFVSEGGNATSLEPVTSVVHEQHPEKLVWENGCLLRCELPIKLPLYYPLNNPTDIEKAYVRATEAVIAKLRDPQAVYLLETFNKTSPDLPPPAIIRGVQLDFCADLSKIRPLTKGDDGFDASSLLCSYFSNKSKAGSEVFSVENADTIHVGVLFSSVGPSSAFAPVAEYLPAQEEASLLVVDIKLDVLCYSSWNLPLRYAVSSLIIPGLIDQLNNLQTSMLPNLLAQHPQLKCYHFSPPGILHPVTVFYELSFGETEMKQVEVRRSLHSRLGLPYDRPLLRIANALDFSKLKNSGIVSLQKGSALLRDVHIGIPSSGITGGTVSLVQGSYEYFHYLQEGYNDSGWGCAYRSLQTIISWFRLQNYSSIEVPSHREIQQALVEIGDKDPSFIGSREWIGAIELSFVLDKLLGVTCKVINVRSGAELPEKCRELALHFESQGTPVMIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGVEDLKKIINGGWCGWKKAVDNKGKNFFLHDKFYNLLLPQRPSMV* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5290 647 PANTHER - 120 646 - -
Lja1g5290 647 Pfam Peptidase family C78 449 639 IPR012462 -
Lja1g5290 647 SUPERFAMILY Cysteine proteinases 467 603 IPR038765 -
Lja1g5290 647 Gene3D - 430 647 - -
Lja1g5290 647 ProSiteProfiles Rhodanese domain profile. 609 627 IPR001763 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5290 K01376 - gmx:100819651 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5290 1 80957889 80963953 Lja1g5290 1 80957889 80963953 ECH