Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5287 ATGAAGCGGTTTTTCAAACCAGTGGAGAAAGATTCAGATGGTTGTCGGAAGAAGCCGAGAGAGAACGACCAAGAGGAACAGGAAGAAGAAGAAGAGACCAGAAAGGAGCCCTTGAAGTTCTTAACCTGGAATGCCAACAGCTTTCTCCTTCGTGTCAAGAACAACTTGCCCGAATTCTCCAAATTCATCACCGCTTTCGATCCCGATGTCATTGCCATACAGGAAGTGCGGATGCCTGCCGCCGGATCCAAGGGTGCACCTAAAAATCAGGGAGAGATAAAAGATGATACAAGCTCTGCCAAGGAAGAAAAGAAGATATTGATGCGTGCACTTTCAAGTCCACCTTTTGGGAGCTATCGTATTTGGTGGTCTCTCGCAGATTCAAAATATGCAGGGACAGCTCTACTTGTAAAAAAATGCTTCAAGCCAAAAAGTGTAGTTTTCAATCTTGATAAAATAGCTTCAAAGCATGAACCCGATGGCCGAGTAATCTTAGCTGAATTTGAAACACTTCGTTTATTGAATACGTATGTACCAAATAATGGATGGAAAGAGGAGGCAAACTCATTTCAGAGGCGAAGAAAATGGGACAAAAGGATTCTGGAATTTGTTACACAAAATTCAGACAAGCCATTGATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATTGATGTGAGTCATCCAGAGTTTTTTTCTGCAGCAAAACTCAACGGTTATGTTCCTCCAAATGAAGAGGATTGTGGGCAGCCTGGTTTTACCTTGGCTGAAAGAAGAAGATTTGGTACCATCTTAAGAGAGGGGAAGCTGGTAGATGCATACAGATTTCTGCACAAGGATAAGGATATGGAACGAGGTTTCTCATGGTCTGGAAATCCAGTTGGAAAGTATCGTGGAAAGCGGATGAGAATAGACTATTTTATAGTTTCAGAAAATTTTAAAGAAAAGATTGTTGCATGTGAAATGCATGGACAGGGGATAGAGTTGCAAGGTTTTTATGGAAGTGATCATTGTCCAGTTACCTTGGAGTTCTCTCCTAGTTCCAACTCTCAAAATGAGGAGCAAGTATAA 1074 0.419 MKRFFKPVEKDSDGCRKKPRENDQEEQEEEEETRKEPLKFLTWNANSFLLRVKNNLPEFSKFITAFDPDVIAIQEVRMPAAGSKGAPKNQGEIKDDTSSAKEEKKILMRALSSPPFGSYRIWWSLADSKYAGTALLVKKCFKPKSVVFNLDKIASKHEPDGRVILAEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQNSDKPLIWCGDLNVSHEEIDVSHPEFFSAAKLNGYVPPNEEDCGQPGFTLAERRRFGTILREGKLVDAYRFLHKDKDMERGFSWSGNPVGKYRGKRMRIDYFIVSENFKEKIVACEMHGQGIELQGFYGSDHCPVTLEFSPSSNSQNEEQV* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5287 357 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g5287 357 MobiDBLite consensus disorder prediction 1 36 - -
Lja1g5287 357 CDD Ape1-like_AP-endo 38 345 - -
Lja1g5287 357 SUPERFAMILY DNase I-like 38 346 IPR036691 -
Lja1g5287 357 ProSiteProfiles AP endonucleases family 1 profile. 38 347 IPR004808 GO:0004518|GO:0006281
Lja1g5287 357 Gene3D Endonuclease/exonuclease/phosphatase 6 347 IPR036691 -
Lja1g5287 357 Pfam Endonuclease/Exonuclease/phosphatase family 41 338 IPR005135 GO:0003824
Lja1g5287 357 PANTHER AP ENDONUCLEASE 28 349 IPR004808 GO:0004518|GO:0006281
Lja1g5287 357 TIGRFAM xth: exodeoxyribonuclease III (xth) 38 345 IPR004808 GO:0004518|GO:0006281
Lja1g5287 357 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 28 349 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5287 - - gmx:100817167 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5287 1 80906249 80913411 Lja1g5287 1 80906249 80913411 ECH