Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5282 ATGGCTAGGGTTCGCGACAACTGGGAGGCGCTGGTTCGAGCGACGCTACAGAGGGAGCAGCTGCGGAATGCTGGCCAAGGCCACCATGCCAGAACTCCGAGTGGGATCGCCGGCGCTGTTCCGCCGTCACTCGCTCAAACCACCAATATTGATTTGATCTTGCAGGCCGCCGATGATATTCAATCGGAGGACGCTAACGTTGCCAGGATCTTGTGTGAGCAGGCATATAGTATGGCTCAAAATCTTGATCCCAACAGTGATGGTAGAGGAATGCTTCAGTTTAAGACTGGTTTGATGTCAGTGATTAAGCAAAAACTTGCTAAAAAGGAAGGGGCCCGAATTGATCGCAATCGTGACCTTGAAAACCTCTGGGAGTTCTATCAACGCTACAAGCGACGTCATAGAGTGGATGACATCCAACGAGAAGAACAAAGATTGCAAGAATCTGGAACTTTTAGCTCTACACTGGGAGAGTTGGACCTTAGATCGTCTGAAATGAAAAAGATAATAGCCACATTACGAGCCTTAGTGGAGGTCATGGAGGCGCTGAGCAAGGATGCCGATCCCAGTGGAGTTGGTGGGCTCATGATGGAAGAGTTGAGAAAACTAAAAAAGTCAAGTGCGACGTTATCTGGAGAGCTGACGCCATACAATATTGTTCCTCTGGAAGCACCCTCATTAACCAATCCTATCAGAATTTTCCCAGAAGTTAGAGGGGCAATATCTGCAATTAGATATACTGAGCAGTTGCCCAGACTTCCTGCTGGATTTAAAGTATCTGGAAAAAGGGATGCAGTCATGTTCGATCTTTTGGAATTTGTATTTGGTTTCCAGACAGATAATGTAAGGAACCAGCGTGAAAATGTTGTTTTGATGATAGCAAATGCACAATCTCGACTTGGCATACCAGCTGAAACTGATCCAAAAATTGATGAGAAAGCAATCAATGAAGTCTTTTTGAAGGTACTAGATAACTATATCAGGTGGTGCAGATATCTGCGCATTCGTCTTGCATGGAATAGTTTAGAGGCAATTAACCGGGATAGGAAGCTTATTCTGCTTTCTCTGTATTTTCTTATTTGGGGTGAAGCTGCAAATGTCCGTTTTCTTCCTGAATGCATTTGCTATATATTCCACAACATGGCAAAGGAATTGGATGCTATTTTGGATCATGGAGAAGCGGGACCAGCAGGCAGCTGCTTAAATGATGATGGTTCTGTGAAATTCCTCGAGAAAATAATTTGTCCAATTTATGAAATATTAGCCGCAGAAGCTAGTACAAGCAGTACTGGGAAAGCTGCACATTCAGCATGGAGGAACTATGATGACTTTAATGAATACTTCTGGTCGCCTGCTTGTTTTGAATTAGGCTGGCCAATGAGGACTGAGTCACCATTCTTACAGAAACCTAAAAAATCAAAAAGGACTGGTAAAAGTAGTTTTGTTGAGCATAGAACGTTTCTTCACTTGTACAGAAGTTTCCATCGTCTTTGGATCTTCTTGGCGTTAATGTTTCAGGCTTTGACAATTATTGCGTTCAACCATGGGCATATAAATTTGGATACATTTAAAACAGTTCTCAGCATTGGGCCATCATATGCAATCATGAATTTCATTAAGAGTTGCTTAGATGTGTTGCTCACATTTGGGGCATACACAACTGCAAGGGGCATGGCTGTGTCAAGGATCGTTATAAGGTTCTTTTGGGGTGGCTTGAGTTCCGTGTTTGTGACATATGTTTACCTGAAGGTTTTACAGGAGAGGAATAGTAATAGCAGTGACAATTCATTCTATTTCCGGATATACCTGCTTGTACTTGGCGTTTATGCAGCTCTACGCCTATTCCTTGCTATGTTGCTCAAATTTCCAGCTTGTCATTCACTTTCTGAAATGTCTGATCAATCATTCTTTCAATTTTTTAAATGGATTTATCAAGAACGGTACTATGTTGGTCGTGGTCTTCATGAGAAGATGTCAGATTACTGCCGGTATGTGAGCTACTGGTTGGTGGTACTTGCCTGCAAATTTACTTTTGCGTACTTTCTCCAGATTAGACCTCTTGTCAAACCAACAAATATCATCGTGGACATTCCATCTTTGACTTACTCCTGGCATGATTTCATCTCAAAGAATAATAACAATGCCTTGACTATAGTTAGCTTGTGGGCTCCGGTTCTGGCTATTTATCTCATGGATATTCACATTTGGTACACTGTCATGTCAGCAATTGTTGGTGGTGTAATTGGTGCACGGGCTCGGCTGGGCGAGATACGTTCAATTGAAATGGTTCATAAACGTTTCGAGAGTTTCCCAGGGGCATTTGTAAAAAATTTGGTCTCACCACAAACCAAAAGGATACCCTTCAATGGACCATCGACTCAGGATTCTCAGGATATGAACAAGGCATATGCTGCCCTGTTTGCTCCATTTTGGAATGAGATAATTAAAAGTTTACGTGAGGAGGATTTTATTAGCAATAGGGAAATGGATCTCCTTTGTATTCCTAGTAATGCTGGAAGTCTAAGATTAGTTCAATGGCCTTTGTTTCTTCTAAGCAGTAAGATCCTGTTGGCGGTTGATTTGGCTTTGGACTGCAAAGATACACAGGCAGATCTGTGGACCAGGATATCTAGGGATGAATATATGGCATATGCAGTTAAGGAGTGCTATTATAGTATTGAAAAAATATTATATTCCCTAGTTGATGATGAAGGAAGACTTTGGGTGGAAAGAATTTTTCGTGAGATTAACAGCAGTATATCAGAGGGTTCACTTGTGATAACGTTGTCTCTCAAGAAGCTTCCACTTGTTTTATCTAGACTCACAGCATTGACTGGACTCCTGATTCGAAATGATCCTGGACTTGCAAAAGGTGCTGCAAAAGCTGTTTATGAGGTGTATGATGTTGTTACTCATGACCTGGTGTCCTCGGATTTGAGGGAGAACCTTGATACATGGAACATTTTAGCTCGAGCTAGGGATGAGGGGCGCCTTTTTTCTAGGGTACAATGGCCTAATGATCCAGAAATTAAAGAGCTCGTGAAGCGGTTGCATCTTCTTCTTACAGTAAAGGACTCTGCTGCTAATGTTCCAAAAAATCTGGAAGCTAGGAGAAGATTAGAGTTTTTCACAAATTCATTGTTTATGGATATGCCATCAGCCAAGCCTGTTAGTGAAACATTGCCATTCAGTGTTTTCACCCCATACTATAGTGAAACTGTACTTTATAGTACATCTGAATTGCAAAAGGAGAATGAAGATGGAATATCAATTCTTTTTTATCTTCAAAAGATATTTCCAGATGAATGGGACAACTTGTTGGAAAGAATTGGTCGAGGAGTCTCTACTGAGGATGCAGAACTTCAAGAAAGTTCCATTGACTCCTTGGAGCTTCGATTTTGGGCTTCTTATCGAGGACAGACTCTGGCTCGGACAGTGCGTGGTATGATGTATTATAGGAGGGCTCTAATGCTACAGAGCTATCTGGAGAGCAGATCACTGGGAGTGGACAGTAATTCGCAAAACAACTTCATTACAAGTCAAGGTTTTGAATCGTCACGTGAATCACGAGCACAAGCAGACTTAAAGTTTACTTATGTTGTATCATGCCAAATATATGGTCAACAAAAGCAGCGAAAGGCACCAGAAGCTGCTGATATTGCTCTCTTGTTACAGAGGAATGAGGGACTCCGAGTTGCTTTCATTCATGTTGATGAAAGCACAACTGATGCAAGCACCCCACGAGTGTTTTATTCGAAGCTTGTCAAAGCTGATATTAATGGGAAAGATCAGGAAATATATTCTATTAGACTTCCTGGGGATCCAAAACTTGGTGAAGGAAAACCAGAAAATCAAAATCATGCTATAATTTTTACACGTGGTGATGCTGTTCAAACTATTGACATGAATCAGGACAATTATCTTGAGGAGGCAATGAAAATGAGAAATCTTCTTGAGGAATTCCATGCTGATCATGGCCTTCGCCCTCCAAGCATTCTTGGAGTGAGGGAACATGTTTTTACTGGAAGTGTCTCATCCTTGGCTTGGTTCATGTCAAATCAAGAAACTAGCTTTGTAACCTTGGCCCAGCGTGTTTTAGCATTCCCTCTCAAAGTTCGTATGCACTATGGACACCCGGATGTATTTGACAGAATATTTCACATAACTCGAGGAGGCATTAGTAAAGCATCACGAGTTATCAATATTAGTGAAGATATATATTCTGGCTTCAACTCTACATTGCGGCTTGGAAATATCACACACCATGAATACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAGATTGCCCTCTTTGAAGGAAAAGTGGCTGGTGGTAATGGAGAGCAAGTGCTTAGCAGGGATATTTATAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTTTCTTTCTACTTCACAACTGTTGGCTATTATGTCTGTACCATGATGACAGTGCTCACAGTATATGTATTCCTATACGGAAGGGCATACCTGGCGTTCTCTGGTCTTGATGAAGCTGTCTCAAAAGAGGCAAAATTGATGGGTAACACAGCACTTGAAGCAGCTTTGAATGCTCAATTTTTGGTCCAGATTGGTGTTTTTACTGCAATACCAATGATTATGGGTTTTATACTTGAATTAGGATTGCTGAAGGCTGTTTTCAGTTTCATCACAATGCAGCTACAGTTGTGTTCTGTCTTCTTCACATTCTCATTGGGAACTAGAACTCACTATTTTGGCCGTACTATTCTCCATGGGGGTGCTAAATACCGAGCAACTGGTAGAGGATTTGTTGTCCGTCACATAAAGTTTGCTGACAATTACAGACTATATTCTAGGAGCCACTTTGTCAAAGCGCTTGAAGTAGCACTACTACTTATAGTTTACATCGCATATGGATATGCAGAGGGAGGTGCTGTGACCTATGTTTTGATAACTCTTAGCAGTTGGTTCCTTGTCATTTCATGGCTTTTTGCTCCCTACATTTTCAATCCCTCTGGTTTCGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACAAGTTGGCTCCTTTACAAAGGAGGAGTAGGGGTAAGGGGAGAAAATAGTTGGGAGTCTTGGTGGGACGAAGAACAGATGCATATCCAAACTTTGAGGGGTCGTATCTTGGAGACAATTTTAAGCGCGAGGTTCTTCTTGTTTCAATATGGTATTGTGTACAAGTTACATCTTACCGGAGACGATACATCACTTGCGATATATGGATTCTCGTGGGCTGTATTGGTTGGACTTGTCTTGATATTTAAGATCTTTACCTACAGCCCAAGGAAATCTGCTGATTTTCAGCTAGTATTGCGATTTACACAGGGAGTTGTATCTATAGGCCTTGTTGCAGCTGTGTGTCTTGTTGTTGCCTTTACTCAACTGTCAATAGCGGACCTTTTTGCGAGCATCCTTGCATTTATCCCTACTGGATGGGGAATATTATCTTTGGCAATTGCATGGAGGAAAATAATTTGGAATCTCGGATTGTGGGATTCTGTCCGTGAGTTCGCTAGAATGTATGATGCCGGAATGGGGATGATTATTTTTGCACCAATAGCGTTCTTATCATGGTTTCCTTTCATCTCCACTTTCCAGTCTCGCCTTCTCTTTAATCAAGCCTTCAGCCGTGGTCTTGAAATCTCCCTCATCCTTGCTGGAAATAAAGCAAATGTTGAGGCTTAA 5718 0.4164 MARVRDNWEALVRATLQREQLRNAGQGHHARTPSGIAGAVPPSLAQTTNIDLILQAADDIQSEDANVARILCEQAYSMAQNLDPNSDGRGMLQFKTGLMSVIKQKLAKKEGARIDRNRDLENLWEFYQRYKRRHRVDDIQREEQRLQESGTFSSTLGELDLRSSEMKKIIATLRALVEVMEALSKDADPSGVGGLMMEELRKLKKSSATLSGELTPYNIVPLEAPSLTNPIRIFPEVRGAISAIRYTEQLPRLPAGFKVSGKRDAVMFDLLEFVFGFQTDNVRNQRENVVLMIANAQSRLGIPAETDPKIDEKAINEVFLKVLDNYIRWCRYLRIRLAWNSLEAINRDRKLILLSLYFLIWGEAANVRFLPECICYIFHNMAKELDAILDHGEAGPAGSCLNDDGSVKFLEKIICPIYEILAAEASTSSTGKAAHSAWRNYDDFNEYFWSPACFELGWPMRTESPFLQKPKKSKRTGKSSFVEHRTFLHLYRSFHRLWIFLALMFQALTIIAFNHGHINLDTFKTVLSIGPSYAIMNFIKSCLDVLLTFGAYTTARGMAVSRIVIRFFWGGLSSVFVTYVYLKVLQERNSNSSDNSFYFRIYLLVLGVYAALRLFLAMLLKFPACHSLSEMSDQSFFQFFKWIYQERYYVGRGLHEKMSDYCRYVSYWLVVLACKFTFAYFLQIRPLVKPTNIIVDIPSLTYSWHDFISKNNNNALTIVSLWAPVLAIYLMDIHIWYTVMSAIVGGVIGARARLGEIRSIEMVHKRFESFPGAFVKNLVSPQTKRIPFNGPSTQDSQDMNKAYAALFAPFWNEIIKSLREEDFISNREMDLLCIPSNAGSLRLVQWPLFLLSSKILLAVDLALDCKDTQADLWTRISRDEYMAYAVKECYYSIEKILYSLVDDEGRLWVERIFREINSSISEGSLVITLSLKKLPLVLSRLTALTGLLIRNDPGLAKGAAKAVYEVYDVVTHDLVSSDLRENLDTWNILARARDEGRLFSRVQWPNDPEIKELVKRLHLLLTVKDSAANVPKNLEARRRLEFFTNSLFMDMPSAKPVSETLPFSVFTPYYSETVLYSTSELQKENEDGISILFYLQKIFPDEWDNLLERIGRGVSTEDAELQESSIDSLELRFWASYRGQTLARTVRGMMYYRRALMLQSYLESRSLGVDSNSQNNFITSQGFESSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEGLRVAFIHVDESTTDASTPRVFYSKLVKADINGKDQEIYSIRLPGDPKLGEGKPENQNHAIIFTRGDAVQTIDMNQDNYLEEAMKMRNLLEEFHADHGLRPPSILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLAFPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYSGFNSTLRLGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYFTTVGYYVCTMMTVLTVYVFLYGRAYLAFSGLDEAVSKEAKLMGNTALEAALNAQFLVQIGVFTAIPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFADNYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLITLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVRGENSWESWWDEEQMHIQTLRGRILETILSARFFLFQYGIVYKLHLTGDDTSLAIYGFSWAVLVGLVLIFKIFTYSPRKSADFQLVLRFTQGVVSIGLVAAVCLVVAFTQLSIADLFASILAFIPTGWGILSLAIAWRKIIWNLGLWDSVREFARMYDAGMGMIIFAPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVEA* 1906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5282 1905 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1903 - -
Lja1g5282 1905 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 350 458 IPR026899 -
Lja1g5282 1905 PANTHER BNAC03G35120D PROTEIN 1 1903 - -
Lja1g5282 1905 Pfam 1,3-beta-glucan synthase component 1030 1727 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Lja1g5282 1905 SMART FKS1_dom1_2 348 461 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5282 Lja-Chr1 80654343 80722376 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5282 1 1905 Glycosyltransferase AT2G36850 77.354 0.0 3105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5282 K11000 - gmx:100777959 3493.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5282 1 80654343 80722376 Lja1g5282 1 80654343 80722376 ECH