Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5265 ATGGGAAGAGATGTGTGTGGAAGTGGAAGAATGGGACCAAAATGGACAAAAATGGAGAAAACCATAAACGATTCTGTCTCCAAGAGCTTTGTTGGAAGCTACTTCAAGCTAGAAGCAAGGAAAACATGCTTCACAAAAGAGCTCCGTGCAGCCACAGCCACTTTTGTCACCATGGCCTACATCATCACCGTCAACGCCACCATCATCGCCGCCTCTGGAGGAACCTGCTCCACCGCTGACTGCACCGCCCCGGCAGGTCCAGACTGCACGGTAAAGCCTAATGCTGGCTATGAAAGCTGCCTTGCAAAGACCAAGAGTGACTTGGTGGTGGCCACTGCTGTGACAGCCATGGTTTCATCTATTGCTATGGGACTCTTAGCCAACCTTCCTTTCGGCCTGGCTCCAGGTATGGGCCCAAATGCTTACCTAGCTTTTAACATGGTAGGCTTTCATGGAACTGGGCCACTCTCATATCAAACAGCAATGGCTGTGGTGTGTATTGAAGGGTGTGCTTTTCTTTTGGTGTCTGCTCTTGGGTTAAGAGGCAAGCTTGCTAAGCTCATACCTCATTCTATTAGGCTTGCTTGTGCTGCTGGGATTGGGCTTTTCATTGCCTTTGTGGGCCTGCAAGCAAGCCAGGGTGTTGGGCTTATTGGGCCTGATGCTTCCAATCTTGTCACCATCACAGCCTGCAAGAGCACTGACCCAATAACAGGAGCATGCTTGGGTGGGAGATTGCAAAGCCCAACATTTTGGCTTGGGCTTGTGGGCTTCCTCATTACAAGCTATGGGCTAATGAAGAACATCAGGGGTAGCATGATTTATGGCATTCTTTTTGTAACCTTGGTGTCATGGTTTAGGCACACAGAGGTGACTTTTTTCCCTGATACTCCACTTGGGGATGCAAATTTCAGCTATTTCAAGAAAGTGGTTGATTTTCATAAAATCAAATCCACTGCTGGGGTTCTTAGTTTCAGTGAATTTAATAAAAAAGAAGTTTGGGAGGCTTTGGCTACCTTGTTCTATGTTGATGTGATTGCATTGACAGGGATCATGTACACACTTGCAGAGATTGGTGAGTTTGTGGATGAGAAAGGGAATTTTGAAGGTGAGTACATGGCTTACTTGGTTGATGCAGGTGGAACAATTGTGGGTTCTGCATTGGGTGTGACAACAACTGCAACATTTGTGGAATCTTCAGCTGGGATGAGAGAAGGGGGTAGAACAGGCTTAACTGCTGTGATGATTGGTGTGTTCTTCTTTTTCTCTCTATTTTTCACTCCTCTGTTTTCCAGTGTTCCTCCTTGGGCTATTGGCCCTTCACTGGTGATGGTTGGGGTGATGATGATGAAGGTGGTGAAGGACATAGATTGGACAAACATTAAGGAAGCTGTTCCTGCTTTTGCTATAATGCTTCTCATGCCTCTCACTTTCTCCATAGCTTATGGGATTATTGGGGGGATTGGGCTCTACATTGCTCTTAGCCTCTTGGATTATGCAACGAGCGCCATAAATTGGTTGAGGAAGATGAGGAGAATGGTGACCAAGGAGCACAATCAAGTATCTGCTACTGCTGGTGTTGAATCAATTGTGGAAATTATATGA 1605 0.4636 MGRDVCGSGRMGPKWTKMEKTINDSVSKSFVGSYFKLEARKTCFTKELRAATATFVTMAYIITVNATIIAASGGTCSTADCTAPAGPDCTVKPNAGYESCLAKTKSDLVVATAVTAMVSSIAMGLLANLPFGLAPGMGPNAYLAFNMVGFHGTGPLSYQTAMAVVCIEGCAFLLVSALGLRGKLAKLIPHSIRLACAAGIGLFIAFVGLQASQGVGLIGPDASNLVTITACKSTDPITGACLGGRLQSPTFWLGLVGFLITSYGLMKNIRGSMIYGILFVTLVSWFRHTEVTFFPDTPLGDANFSYFKKVVDFHKIKSTAGVLSFSEFNKKEVWEALATLFYVDVIALTGIMYTLAEIGEFVDEKGNFEGEYMAYLVDAGGTIVGSALGVTTTATFVESSAGMREGGRTGLTAVMIGVFFFFSLFFTPLFSSVPPWAIGPSLVMVGVMMMKVVKDIDWTNIKEAVPAFAIMLLMPLTFSIAYGIIGGIGLYIALSLLDYATSAINWLRKMRRMVTKEHNQVSATAGVESIVEII* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5265 534 Pfam Permease family 104 484 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lja1g5265 534 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 10 534 IPR045018 GO:0015205
Lja1g5265 534 PANTHER ADENINE/GUANINE PERMEASE AZG2 10 534 IPR029950 GO:0005345|GO:0006863
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5265 Lja-Chr1 79656308 79658396 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5265 K06901 - gmx:100808299 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5265 1 79656308 79658396 Lja1g5265 1 79656308 79658396 ECH