Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5264 ATGGGGAAGAAGACGAAGAAAGTCGGCAAAGGCAAAGAGAAAACGGAGAAGAAAACTGCCAAAGCTGAAGAGAAGCGAGCTCGCCGCGAAACCAAGAAGCTTTCTCCAGAGGACGACATCGACGCCATTCTGTTGAGTATACAAAAGGAGGATGCTAAAAAGAAGGAAGTTCACGTTGAAGACAATGTTCCCGCGCCTTCTCCTCGCTCCAACTGCACCCTCACTGTGAATCCCTTGAAAGAGACCGAGTTGATTCTCTTTGGCGGCGAATTCTACAACGGGAGCAAGACTTTTATCTATGGCGATCTTTACCGGTATGATGTGGAGAAGCTGGAATGGAAGTTAGTTTCGAGTCCGAACAGTCCTCCTCCTCGCAGCGCTCATCAGGCTGTTGCTTGGAAGAATTATATTTATATTTTTGGTGGTGAATTTACGTCTCCTAACCAAGAGCGGTTCCATCACTACAAGGATTTTTGGATGTTGGACTTGAAAACAAACCAGTGGGAACAGATTAATTTAAAAGGGTGCCCGAGTCCGCGCTCTGGACATCGAATGGTGTTATACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGATACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTTGATCAATTCAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCTACTGGGCGTAGTGGTTTTCAGTTATTTGTTTATCAAGATGATATTTTTTTGTATGGTGGCTATTCAAAAGACGTGTCATCGGATAAGAATGCCTCTGAGAAAGGAATTGTTCATTCAGATATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCAGGGGCCCGTGCGGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTACTATTCGGGGGTGTTGTGGATATAGAAGTTGAAGGTGATGTAATGATGAGCTTGTTCTTAAACGAGCTTTATGGTTTTCAGTTAGATACCAATCGCTGGTATCCTCTGGAGTTAAGAAAGGAGAAGTCGACGAAAGAAAAGTTAAAAAAGATAGAAAAAAATCGTGCTGATGACGTCAACAAGAATGTAAATCCACCGTGTTCAGCAACAGAAGAAACAGAGGATTCTGAGTTTGAAGAAAGCAACATCAATGATCTATCTCAGAATATTACATCAAACATGACTATTGATGATAGTGAAACACTTACCAAATCTGAAGGAAAGTCTAAGGAGTCTGGTGCTAACTTGGACATTCAGAGTTCTTTGCCAGAGGCAGTGAAGCCCTGTGGACGTATTAATTCCTGCATGGCTGTCGGAAGAGATACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAGATCACTCTTGATGACTTGTATTCTCTGAACCTTAGCAAACTTGATGAATGGAAGTGCATTATACCGGCATCTGAATCTGAATGGGTGGAAGCTTCAGAGGATGATGAGGATGATGAAGAAAATGAAGATGATGATGAAGATGAATCTGATGATGATAGTGATGAAGATGAAGAGGATGAGGAAGAGGAGGTGGAGGAGGCCCAGACTGCGTCAGTTCAGGTGGGAGATGCTGTTGCTTTACTCAAGGGAGCAGGAAAGAATCTGCGCAGGAAAGAAAGAAGGTCACGGATAGAGCAGATCAGAGCTAGCCTTGGCTTGTCAGATTCACAGAGAACACCGTTGCCAGGTGAATCATTGAGGGATTTCTATAAGCGTACAAATATGTATTGGCAAATGGCAGCCCATGAACATACTCAACACACTGGAAAAGAACTTCGCAAAGATGGTTTTGATCTTGCTGAAGCTCGGTATAAGGAGCTAAAACCTATTCTTGACGAGCTTGCTCTATTAGAAGCTGAGCAGAAAGCTGATGAGGCTGAAGGGCCTGAAACTAGTGCAAAGGCAAGAGGCAAGAAGAAAAGTAGAAATTGA 1989 0.4294 MGKKTKKVGKGKEKTEKKTAKAEEKRARRETKKLSPEDDIDAILLSIQKEDAKKKEVHVEDNVPAPSPRSNCTLTVNPLKETELILFGGEFYNGSKTFIYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQINLKGCPSPRSGHRMVLYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPTGRSGFQLFVYQDDIFLYGGYSKDVSSDKNASEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGARAGFSMCVHKRRALLFGGVVDIEVEGDVMMSLFLNELYGFQLDTNRWYPLELRKEKSTKEKLKKIEKNRADDVNKNVNPPCSATEETEDSEFEESNINDLSQNITSNMTIDDSETLTKSEGKSKESGANLDIQSSLPEAVKPCGRINSCMAVGRDTLYIYGGMMEIKDQEITLDDLYSLNLSKLDEWKCIIPASESEWVEASEDDEDDEENEDDDEDESDDDSDEDEEDEEEEVEEAQTASVQVGDAVALLKGAGKNLRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYKRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYKELKPILDELALLEAEQKADEAEGPETSAKARGKKKSRN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5264 662 MobiDBLite consensus disorder prediction 639 655 - -
Lja1g5264 662 MobiDBLite consensus disorder prediction 1 35 - -
Lja1g5264 662 Pfam Kelch motif 237 290 IPR011498 GO:0005515
Lja1g5264 662 MobiDBLite consensus disorder prediction 366 426 - -
Lja1g5264 662 MobiDBLite consensus disorder prediction 392 410 - -
Lja1g5264 662 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 654 - -
Lja1g5264 662 Coils Coil 12 32 - -
Lja1g5264 662 Pfam Galactose oxidase, central domain 68 122 - -
Lja1g5264 662 Pfam Galactose oxidase, central domain 445 488 - -
Lja1g5264 662 MobiDBLite consensus disorder prediction 639 662 - -
Lja1g5264 662 Gene3D - 42 372 IPR015915 GO:0005515
Lja1g5264 662 MobiDBLite consensus disorder prediction 494 533 - -
Lja1g5264 662 SUPERFAMILY Kelch motif 82 485 IPR015915 GO:0005515
Lja1g5264 662 MobiDBLite consensus disorder prediction 491 541 - -
Lja1g5264 662 MobiDBLite consensus disorder prediction 12 35 - -
Lja1g5264 662 Pfam Galactose oxidase, central domain 135 187 - -
Lja1g5264 662 Pfam Domain of unknown function (DUF4110) 571 656 IPR025183 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5264 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 27.513 1.19e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5264 - - gmx:100818228 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5264 1 79623081 79633230 Lja1g5264 1 79623081 79633230 ECH