Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5259 ATGGAGGAAGGTTCAGAGAAGAAGAGAGAGTTGGAAGGTGCAGTGGTTGGCAAGGTCGCAGAAGTGATATCAGCTATAAAGAATGCGAAGCACGTTGATCAAGTCATTTGTGCGCTTCACTCCATCGCCACCCTTCTTTTCCCTCTTCACCCTTCTCTTCTCTCAGGTAGCATTGATGAGAGTTACAGAGACCAGCTTTCAAGTGTCGAAGTTCCTTCAGCCGAAGAACGAGATGATTGGTGGCGTGCGTTTTATGCAGGGGCTGCTTTTCCTACACTGGCTAGGTTCTTGTTACTTGATGTTGCCCCCAATTGGTTGGCCTGTTTTCCCGTTTCAGCACAGAAACATGTTTATGATGTTTTTTTTGTTCGTGGACTTGTCAGTGAGGTGCTACAGATTTTGGTTCCTTTTCTCCAGCAGAAAGGGAATGATGGTGTTGATGTTAATGCTACCCTCTCAAATATAGAAAGATTGCTTGTACTGAGCCTGCTTGAAAATAATGGGGTGCTCCATTTAGCAAGAGAGTTTGGTTGTCCTTCCAAATTGAAAGGTTTTACGAATGAACACATCCAGCTGGCGGTAGCTAGGCTGGCACAGATTGTTGCATCTATTCCTGACAAAGCAAGGATGAACTCCTCAGCTTCATTGTCATCACATGTGTTCTTCAAGCAGATTATTGTCCAACTACTCTCCCTGGCAGAAGAAAGAGAGATGAGTTTACTAGAAAATGTAGACCCCTCAGGTGAAATGGACAAAAATGGTGCACTGTTATTTGTAGGGGAAATGTTCTCTCGCATTTGTCGCCGTGGCTCTGCTGATCTGCTGTCAAGTGAGTTAATTCCCCAAGTTCTGGGGCTCGTGAAAAGCTGCTTAGCATCAAATAATGGCTCAGTTACGGAAGAATTGCTTGAATCACGACCAGATGCAGTGTTTTGGTTAAGGTTGATGGGATCAATTAAGGATCCTTATACTACAGAAAGAATCTCTGAGCAGATTTTGCATAAACTAGAAACTCAACATGTGGATGATGTTCAAGCATATTGGGTCTTGTGGCTCTTATTTCATCGAATTATCAAGCTTCAGGCTTCTGTCAGGTCCATGTTTGTTGACAAATTCCTGCTCTGGAAAGTATTCCCTTTTAGCTGCCTGAAATGGATCCTTCAATTTTCTGTTCATGAATGCCCACCTGATACCTCCTTGCCAGGACAAAATCGCGCTGGTCTTTTGAAGATAGTCCAACGTCTGCTAACAGCTTGGTCTAAAAAGGAATTTGTGCAAACAGCACCTATTGAGCAACAAGCTTATATAACTGCTGCACTTGGCATTTCTCTGGAGACAATGTCTAAGGATGAGTTGGATGGGATGAAGGATGCCATGCATTTGATTCTTCAAGGAGTCAGCTGTAGGCTGGAAAGTCCTAATCATTTAGTTCGAAAAATGGCTAGCAGTGTTGCTTTAGCATTGTCTAAAATTATCGATCCAAAAAATCCTCTCTACCTTGATGATAGCTGCAATGAGGGGGAAATTGATTGGGAATTTAAATCCACTGTACCCAAGAAAGGGGCTCTGGCTGTCTCAAGTTGCGGAGAAAAAGGTGTTGTATCTGCGGTATCAGGTCCAGAAAGGGACTTGGATTCCCCCTCTAATAAAGAGAAAAGCGTTAGTGTAAAGGGTCCAAAGAAGTTATTGGACTTTAATGTGCTTGATCCAGATGAGATTATTGATCCAGCATCACTTAATCTTGACTCAGATGTTAATGATGAGGATGATGGTGATAGTGCAAGTGAGAACTCATATTCCTCAAGTGATTCATCTTTACAGCCGTATGATTTGTTGGATGATGATTCAGATTTGAAAAGAAATTTTTCACAGTTGTCTGATGTAGTTGCAGCTCTTAGAAAACCTGACGATGCTGATGGGGTGGAAAGAGCTCTTGATGTAGCTGAAAAGCTCGTAAGAGCTACTCCGGACGAACTCAAACATGCAGCAAGGGATCTAACCAGAACTCTTGTTCAGGTTCGTTGCTCTGATATTGCTGTAGAAGGTGCAGAAGATTCAGCAGAAGACAAAAGGCAAAGGGCATTAGTTGCCTTGGCAGTCACATGCCCATTTGAATCACTTGACATACTAAATAACCTTTTGTATTCACCTAACGTAGATATTAGTCAACGCATTATGATACTAGATGTCATGACAGAAGCAGCTCAGGAGCTTGCTGAATCAAAAATTATGAAACCCAAGCGCGAGACTAGTTCCCTTGTTTCAGTTGCTTCAGATAACCGACCCTGGTTCTTGCCTAGCAGCACAGGGACTCCTGGAGCTGGTTCCTGGAAAGAGATCTCAGGTACTGGTTCTTTGTTGAATTGGTCAAATGTCTATGAGAGGGAACTTCCCGCAAAAAATAATCAGGTCAAGAAAGGGAAAACACGCCGTTGGAGCCTAAGATCCCCTGCACAACATAACCCGATGGAGTTTTCTCATAACAAGTTTCCCATGTATGCTGCTGCATTCATGCTTCCTGCCATGGAGGGATATGATAAGAAAAGGCATGGTGTTGACTTGCTTGGCAGGGACTTCATTGTATTGGGGAAACTCATTCATATGCTTGGAGTGTGTATGAAATCTGCTTCCATGCATCCAGAAGCATCTGTGATGGCTCCCTCCCTTCTAGATATGTTGAGATCCAGAGAGATATGCAATCACCCAGAAGCATATGTGAGAAGAGCTGTCCTTTTTGCAGCTGCATGCACTTTGGTTGCCCTCCATCCCTCATACATTTCATCTGCCTTACTTGAAGGAAATGTTGAAATTTCTGCTGGCCTCGAATGGATTCGCACATGGGCCCTTGACGTAGCCGAGTCAGACACAGATAAAGAATGCTACACTATGGCTATGACATGTTTACAACTCCATGCTGAGATGGCTCTTCAAACTGCCCGAGCATTGGAGTCAGCAAGAAGTTCATTCAAAGCAGGCACTACTATCCCTTCCGATGGATCCAAAATTACCATTAAAATTCCCTACTTAAACGGGGATTAG 3039 0.4344 MEEGSEKKRELEGAVVGKVAEVISAIKNAKHVDQVICALHSIATLLFPLHPSLLSGSIDESYRDQLSSVEVPSAEERDDWWRAFYAGAAFPTLARFLLLDVAPNWLACFPVSAQKHVYDVFFVRGLVSEVLQILVPFLQQKGNDGVDVNATLSNIERLLVLSLLENNGVLHLAREFGCPSKLKGFTNEHIQLAVARLAQIVASIPDKARMNSSASLSSHVFFKQIIVQLLSLAEEREMSLLENVDPSGEMDKNGALLFVGEMFSRICRRGSADLLSSELIPQVLGLVKSCLASNNGSVTEELLESRPDAVFWLRLMGSIKDPYTTERISEQILHKLETQHVDDVQAYWVLWLLFHRIIKLQASVRSMFVDKFLLWKVFPFSCLKWILQFSVHECPPDTSLPGQNRAGLLKIVQRLLTAWSKKEFVQTAPIEQQAYITAALGISLETMSKDELDGMKDAMHLILQGVSCRLESPNHLVRKMASSVALALSKIIDPKNPLYLDDSCNEGEIDWEFKSTVPKKGALAVSSCGEKGVVSAVSGPERDLDSPSNKEKSVSVKGPKKLLDFNVLDPDEIIDPASLNLDSDVNDEDDGDSASENSYSSSDSSLQPYDLLDDDSDLKRNFSQLSDVVAALRKPDDADGVERALDVAEKLVRATPDELKHAARDLTRTLVQVRCSDIAVEGAEDSAEDKRQRALVALAVTCPFESLDILNNLLYSPNVDISQRIMILDVMTEAAQELAESKIMKPKRETSSLVSVASDNRPWFLPSSTGTPGAGSWKEISGTGSLLNWSNVYERELPAKNNQVKKGKTRRWSLRSPAQHNPMEFSHNKFPMYAAAFMLPAMEGYDKKRHGVDLLGRDFIVLGKLIHMLGVCMKSASMHPEASVMAPSLLDMLRSREICNHPEAYVRRAVLFAAACTLVALHPSYISSALLEGNVEISAGLEWIRTWALDVAESDTDKECYTMAMTCLQLHAEMALQTARALESARSSFKAGTTIPSDGSKITIKIPYLNGD* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5259 1012 MobiDBLite consensus disorder prediction 535 555 - -
Lja1g5259 1012 MobiDBLite consensus disorder prediction 576 610 - -
Lja1g5259 1012 PANTHER TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER 9 978 - -
Lja1g5259 1012 Pfam Telomere length regulation protein 624 735 IPR019337 -
Lja1g5259 1012 Gene3D - 617 754 IPR038528 -
Lja1g5259 1012 MobiDBLite consensus disorder prediction 595 609 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5259 K11137 - gmx:100779550 1583.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5259 1 79516583 79524592 Lja1g5259 1 79516583 79524592 ECH