Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5258 ATGAGATTACGCTCAGCATCATCATTGAAAACTTCAAAGGTCGCTAACAATGAAGTGATTTATGTGAAGGGAGAAACAGAAACTAACTCAGAACATGGAACAAAAATTGTTTATACTCGTCGAAGAAAGAAGGGTAAGCCTGTAAGAGATGTGATAGGAAGTGTAATTTCATCATTGCCATCATACCTGAGCGATATTCCCCGGCGACCGCGAACAAAGAAGAAAAAATTCAAGGCTGAAGAAGCTCTCCCTAGACCCAAGCTAGACAGTGGAGTCTTTGATAATAACTTAGTGAAAATATGGAACAGTTTCTCAGAAGATAAGAGGAAGCCCTTTGCATACTTTGACAGCTTATGGTTTAGCCTTTACAGGGCTGCTTCATCCAAAGACAAGGTGCTGACTTGGATTAAAAAAGAACATATTTTCTCAAAGGCATATGTTTTTGTTCCTATAGTCTGCTGGGGTCACTGGAGTCTTTTGATCTTCTGCCATTTTGGTGAGAGCTTGCAGTCAACTACTAGATCGCGGTGTATGTTGTTGCTGGATTCTCTTGAAATGGTGAATCCAAGACGCCTTGAACCAGACATAAGAAGGTTTGTTGTAGACATTTATAAAGCATGGGACAGGCCAGAGACTAAGAATCTCATATATCAGATTCCTTTATTGGTTCCCAAGGTGCCTCAACAAAGAGACGGTAATGAATGTGGGAACTTCGTCCTTTATTTCATTAACTTGTTTTTGAGATGTGCTCCTGAGAATTTTAGCATGGGCGGGTACCCTTACTTCATGAAAAAAGATTGGTTTACCTTTGAAGACTTTGACAGGTTTTGTGAGAGACTTTATTCATTGAATTAA 855 0.3965 MRLRSASSLKTSKVANNEVIYVKGETETNSEHGTKIVYTRRRKKGKPVRDVIGSVISSLPSYLSDIPRRPRTKKKKFKAEEALPRPKLDSGVFDNNLVKIWNSFSEDKRKPFAYFDSLWFSLYRAASSKDKVLTWIKKEHIFSKAYVFVPIVCWGHWSLLIFCHFGESLQSTTRSRCMLLLDSLEMVNPRRLEPDIRRFVVDIYKAWDRPETKNLIYQIPLLVPKVPQQRDGNECGNFVLYFINLFLRCAPENFSMGGYPYFMKKDWFTFEDFDRFCERLYSLN* 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5258 284 Gene3D Adenoviral Proteinase; Chain A 75 269 - -
Lja1g5258 284 Pfam Ulp1 protease family, C-terminal catalytic domain 130 267 IPR003653 GO:0006508|GO:0008234
Lja1g5258 284 SUPERFAMILY Cysteine proteinases 87 262 IPR038765 -
Lja1g5258 284 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 39 282 - -
Lja1g5258 284 ProSiteProfiles Ubiquitin-like protease family profile. 73 246 IPR003653 GO:0006508|GO:0008234
Lja1g5258 284 PANTHER CYSTEINE PROTEINASES SUPERFAMILY PROTEIN 39 282 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5258 - - cam:101493534 372.474
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5258 1 79508490 79514729 Lja1g5258 1 79508490 79514729 ECH