Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5255 ATGGCGACGGCGGCATTCAAATCCACCACGAAGAGAACCCCCGTCGCCGGAGCTTCCTCCACCGAGGACACCGCCTCCTCCCTCCGCCACCGCCGTTCCCGGAGCCTCAGCCGACCCTCCCGCCCTCTCTCCTCCCGCGACGAGGATCGTCCGAAAGGGAGCTTCGTCAACACCGTTAGGGGCTCCGGCTTCCCGGAAATCAGCCTCGATGATCTCGCCATCGAGTTTTTCGAGTCCGCCGACCGCGGTCGCTTCAGTTCCAGGAGCTCTGAGTCGGAGGCCACTCCGGCCGGCGGGACTGCGTCGCAGAGGCGGGGCAGGTCAGCTTCCAGGAAGGGCTTGGGTGGAGCTGGTGGTGATGATCGAAGGAGTAGCATCGGCGGCGGCGGCGGTGGAGGAAGAGCGGTGTCAGATGCTAATTCGAGAAGGAGAAGATCGCTTTCAGTAGTTCGGTACCAAATTAGTGATTCTGAGAGTGACCTGGATCATTCTCAGAATTCTAAAAGTCGTGCAAATCTGAAAAATACTGATTTTGGAAACAAGCTAATACTCAAGCCAGTTGCTTCAGATCAAAGACCAGCACTGAGAAAGTCCCTAAGCCAGAAGGACTTGAGATCATATGATGGCTACTCTAGTCATTCTTCAGTTCTCACTGATGATGAAGGAGCAGGTGCTCACTTCAATAGAAGTGGAATGGAGAAACTGCGAGCAGGATATGCACAGAAGAAGATGCCACTTCCTGACATGGATAATGGATTGCACAAAGCAATGCGGAAGGAATTAAGGCATATGGAATCTGAACAAGCTGTGGTGAAATCAAGGCCCTCCTCTTCATCCACGGGTGATTGCATGCTGTCGGACAATGCTGATGTCATTAAGGGATTTAAGGCTATTTCTTCAATCAGAAGGAGCTATGAAACTGAACTGGAACAGTCAGAGAAACGAAAACAAGATTTATTGGCTGAAATAGTGTTTGAGGAGCAGCGAGGCAGAGAACTTTCAAAGATTGTTAATGAATTGGTTCCTGCTTCAAAGATCAATTCTATACAAAAACCAGCAAGAGCCAGGAAGAGAAGTACTGACAGAAGTAGAATGTCCATGCGCTTGACTGAGGAGGCTGAGAAATATATTGAGGATTTTATATCAAATGTTGAAGATACAGATATTTCGTCACTTGATGGTGAAAGGAGTGAGACAAGCTCATCCATTGGAGGACTGATAAAACCAGAAACATCTAATAGTCCACCAATTCCTAGATCTATTCCTGCTTTGATGGATGGGATTACGTTGCCATGGTTGCAATGGGAGACATGTAATGATGCTTCTCCTATGACAAGCATGAATAACACCCTTATAACTTCAAAAACTGCGAGTTCCACTCAGGAAACCACCAAACTTCAAGATCAACGTAGCCATTCTGCCAGCAGCCGCGGAAGCTGGAGCCCTGATTGCCTTCAGGAATATATTGGGAAGGATGTATTCAATAAAGTTTATGGCTACAAGGACCAGTCATTCTCAGCTAAGTCTAAAGAATTGAGGTATGACATAGATGATTATCTCAAAGTTAAAACCAATGAAGACTTTCTGGTTGAGAGATGGAAGCAAAGACAGAGAATTAATTCAGGTAGTCTACTATTATGTCACCCAAGATTATTTTAG 1659 0.472 MATAAFKSTTKRTPVAGASSTEDTASSLRHRRSRSLSRPSRPLSSRDEDRPKGSFVNTVRGSGFPEISLDDLAIEFFESADRGRFSSRSSESEATPAGGTASQRRGRSASRKGLGGAGGDDRRSSIGGGGGGGRAVSDANSRRRRSLSVVRYQISDSESDLDHSQNSKSRANLKNTDFGNKLILKPVASDQRPALRKSLSQKDLRSYDGYSSHSSVLTDDEGAGAHFNRSGMEKLRAGYAQKKMPLPDMDNGLHKAMRKELRHMESEQAVVKSRPSSSSTGDCMLSDNADVIKGFKAISSIRRSYETELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELVPASKINSIQKPARARKRSTDRSRMSMRLTEEAEKYIEDFISNVEDTDISSLDGERSETSSSIGGLIKPETSNSPPIPRSIPALMDGITLPWLQWETCNDASPMTSMNNTLITSKTASSTQETTKLQDQRSHSASSRGSWSPDCLQEYIGKDVFNKVYGYKDQSFSAKSKELRYDIDDYLKVKTNEDFLVERWKQRQRINSGSLLLCHPRLF* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5255 552 MobiDBLite consensus disorder prediction 189 215 - -
Lja1g5255 552 Coils Coil 302 329 - -
Lja1g5255 552 PANTHER BNAC03G27780D PROTEIN 1 548 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 266 285 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 83 148 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 389 417 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 1 24 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 155 174 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 89 107 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 1 64 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 270 285 - -
Lja1g5255 552 MobiDBLite consensus disorder prediction 456 480 - -
Lja1g5255 552 PANTHER OS11G0129800 PROTEIN 1 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5255 Lja-Chr1 79418590 79424139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5255 - - gmx:100805104 699.123