Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5227 ATGGAAGAAACTTGTGATTTTCGAAGTTGGGATGAGTTGATTCCTGATGCCCTTGGGGTGATATTCACCAATCTCTCTCTCCAAGAAAGAGTGACAGTGATCCCTAGGGTTTGTAAATCATGGGCTAAAGCAGTGACTGAACCTTCTTGCTGGCAAGAGATAGACATTAAGGAGTGGAACCGCTTTCAACCTGAGCAACTTGACCAGATGCTTGAGATGCTCATCACAAGAAGTCGTGGATCGCTCCGCAGTCTCAGTGTTTCTGGTCTCCAATCTGAGAGGATGTTCACTTTCATTGCTGAAAATGCTGGCTCCCTCCAGACACTGCGGTTGCCAAGGAGCAGCATGAGTGATTCAATTGTAGATCAGATTGCTGGAAGGCTTTCCATGATTTCTTTCTTGGATGTGAGCTACTGCATTAAAATCGGTGCCTCTGCGCTCGAGACGATAGGCAAGAACTGCAAACTGCTGGAAGTGTTGTGCCGGAACATGCATCCGTTGGACACCGCAGGCAAGCCGTTGCAAGATGATGAAGCATATGCAATTGCCTCCACGATGCCTAAGCTCAAGCACCTTGAAATGGCTTATCATCAAATCAGCACTTCAGGTGCTCTTCAAATACTTTCAAGCTGTCCTAAGCTTGAGTTTTTCGATCAGAGAGGGTGTTGGGGTGTCCATCTCGACGATGATGTGTTTCTGAAGCAGAATTTTCCAAAGCTGAAGGTTTTAGGGCCTTTTGTTTTTGACGCTCATGGGATTGATGCATGGGATGATGATTGTTCAGATGTATCAGATGCTTCTGAGTGGGACTTTGTGGATGGTGGTATGGGTGAGTACTATGTTGATGATAGTGATAGTTATGATGGGATGTGGGATGAAGAAGGAAGGATAGATGAGCTTCAGTTTGGGTTTTATGAAGGGATAGAAGATGCAGCAATGTATTGGCCTCCATCTCCATAA 960 0.4562 MEETCDFRSWDELIPDALGVIFTNLSLQERVTVIPRVCKSWAKAVTEPSCWQEIDIKEWNRFQPEQLDQMLEMLITRSRGSLRSLSVSGLQSERMFTFIAENAGSLQTLRLPRSSMSDSIVDQIAGRLSMISFLDVSYCIKIGASALETIGKNCKLLEVLCRNMHPLDTAGKPLQDDEAYAIASTMPKLKHLEMAYHQISTSGALQILSSCPKLEFFDQRGCWGVHLDDDVFLKQNFPKLKVLGPFVFDAHGIDAWDDDCSDVSDASEWDFVDGGMGEYYVDDSDSYDGMWDEEGRIDELQFGFYEGIEDAAMYWPPSP* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5227 319 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 6 319 - -
Lja1g5227 319 SUPERFAMILY RNI-like 36 243 - -
Lja1g5227 319 Gene3D Ribonuclease Inhibitor 3 264 IPR032675 -
Lja1g5227 319 PANTHER F-BOX PROTEIN FBW2 6 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5227 Lja-Chr1 78219967 78222622 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5227 - - gmx:100810036 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5227 1 78219967 78222622 Lja1g5227 1 78219967 78222622 ECH