Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5223 ATGGCATCTTCTCAAATGTTTCTCAAGATCTTCCTTCTAATCTGTGTCTTTCACCTCTCCTTTGCTTCTAGGAGGTTGAATGAACTGGTTCAGGACCAGTCCCAGCTACTTCAATACCACAACGGTCCTTTGCTATACGGCAAAATCTCCGTGAACCTGATCTGGTACGGCCAGTTCAAACCCTCTCAAAAAGCCATAGTCTCCGATTTCATCACCTCCCTGTCATCCCCAACCACCCAGACAAACCAACCATCCGTCGCCACGTGGTGGAAAACCACCGAGAAATACTACCACCTCACCTCCAAGAAGAAAACCACCACTCCTCGGCTCTCCCTTTCACTGGGAAAACAGATTCTCGACGAGAAGTACTCGCTCGGGAAATCACTCACGAGCAAGCACCTCGTCGAATTGGCTTCCAAAGGAGAACAGAGAAACGCGATCAACGTGGTTCTAACCTCTTCTGACGTGGCGGTGGAAGGTTTCTGTATGAGCCGATGTGGGACTCACGGGTCTTCCGCTTCGTCTGTGGGCCCCACGAAGGGTAAGAGTTACAAATTTGCTTACATCTGGGTGGGTAACTCTGAGGCCCAATGTCCCGGCCAGTGCGCGTGGCCGTTCCACCAGCCGATGTATGGGCCTCAGAGTCCGCCGCCGTTGGGTGCGCCCAACAATGATGTAGGCCTTGATGGAATGGTCATCAATCTCGCTAGCCTCTTGGCCGGAACCGCCACGAACCCTTTTGGAAATGGGTTTTTTCAGGGTGCTGCTGAGGCTCCATTGGAAGCTGCATCTGCTTGTCCTGGGGTTTATGGTAAAGGGGCTTACCCTGGTTATGCTGGGAATTTGCTGGTTGATTCTGCTACTGGTGCTAGCTACAACGCCAAGGGTGAAAATGGGAGGAAGTATTTGCTTCCTGCTTTGTATGATCCTGCTACTTCAAAATGTTCAACGCTTGTGTGA 960 0.5135 MASSQMFLKIFLLICVFHLSFASRRLNELVQDQSQLLQYHNGPLLYGKISVNLIWYGQFKPSQKAIVSDFITSLSSPTTQTNQPSVATWWKTTEKYYHLTSKKKTTTPRLSLSLGKQILDEKYSLGKSLTSKHLVELASKGEQRNAINVVLTSSDVAVEGFCMSRCGTHGSSASSVGPTKGKSYKFAYIWVGNSEAQCPGQCAWPFHQPMYGPQSPPPLGAPNNDVGLDGMVINLASLLAGTATNPFGNGFFQGAAEAPLEAASACPGVYGKGAYPGYAGNLLVDSATGASYNAKGENGRKYLLPALYDPATSKCSTLV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5223 319 PANTHER PROTEIN EXORDIUM-RELATED 2 319 - -
Lja1g5223 319 PANTHER PROTEIN EXORDIUM-LIKE 5 2 319 IPR006766 -
Lja1g5223 319 Pfam Phosphate-induced protein 1 conserved region 37 318 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5223 Lja-Chr1 77930709 77932089 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5223 - - gmx:100794117 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5223 1 77930709 77932089 Lja1g5223 1 77930709 77932089 ECH