Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5217 ATGATGATGATGAAGATTTGGGGATTGAAGATTGTGTTGGCCATGTTCCTCTGTTGTGGGACCCTCTCCTGCACCGCTCATCCGCGTAGGGTTTCTCTCTCCTCCACCGTTTGTCCTGCGGAGACCATTTTCGATTTCATCTTAGGGTTTCCCGACAAGACCTGTTCCGTGCCCGATTCTCTTCGATCCATTCGTTATGTTGGTGTCACCGAGGGAGATGAGGTTACTTTGCAGAAAGCGCTGAATATGGTTCACAAAAATAATCAGGAGTATGTAGCTATACTGTTCTATGCATCGTGGTGTCCTTTCTCTCGGATATTTAGACCAGTTTTCTCCGTCCTCTCTCTACTATATCCTTCAATTCCTCATTTTGCTATTGAAGAATCATCCGTGAGGCCAAGCACGCTGTCTAAATATGGTGTCCATGGTTTTCCTACGCTGTTCATTTTAAATTCTACCATGCGAGTTCGTTATCAGGGATCTCGAACCCTTGGTTCTCTCGTTGGTTTCTACAGTGATGTCACTGGGATTAGGATTGATTCACTTGATCAAGTGTCCCTTGACAATGTTGGGCGTCCATCAGCTAATGAGATTAATGGTAACACTGAGCCAGAAAGCTGTCCATTTTCATGGGCTAGGTCCCCTGAAAATTTACTGCGCCAGGAAACTTATTTGGCTCTGGCCACTGCTTTTGTGGTTTTGAGATTACTCTACTTATTTTTTCCTACACTACTTATATGTTTTCAATATGCTTGGAGACGGGTCATTCGAAATGTAAGATTAGGGAGCTTGCCAGATCATGCGTTGGTTTATTTGAAGCGAATAATACAGTCATTTAAGTCACTGAAAGAGCCATGCAAGAGAAGTAATCTGCAAGAAGGAGCATTCAATGCTAAAGCATGGGCTTCCAAGTCCCTTGCCACAGTTTCAATTGGAGAGGAAAGTAGCAGCCGTGGGATTCACCAGTAA 969 0.4407 MMMMKIWGLKIVLAMFLCCGTLSCTAHPRRVSLSSTVCPAETIFDFILGFPDKTCSVPDSLRSIRYVGVTEGDEVTLQKALNMVHKNNQEYVAILFYASWCPFSRIFRPVFSVLSLLYPSIPHFAIEESSVRPSTLSKYGVHGFPTLFILNSTMRVRYQGSRTLGSLVGFYSDVTGIRIDSLDQVSLDNVGRPSANEINGNTEPESCPFSWARSPENLLRQETYLALATAFVVLRLLYLFFPTLLICFQYAWRRVIRNVRLGSLPDHALVYLKRIIQSFKSLKEPCKRSNLQEGAFNAKAWASKSLATVSIGEESSSRGIHQ* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5217 322 SUPERFAMILY Thioredoxin-like 83 175 IPR036249 -
Lja1g5217 322 CDD PDI_a_ERp44_like 72 171 - -
Lja1g5217 322 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 2 320 IPR044606 -
Lja1g5217 322 Gene3D Glutaredoxin 67 180 - -
Lja1g5217 322 PANTHER 5'-ADENYLYLSULFATE REDUCTASE-LIKE 4-RELATED 2 320 - -
Lja1g5217 322 Pfam Thioredoxin 86 169 IPR013766 -
Lja1g5217 322 ProSiteProfiles Thioredoxin domain profile. 55 187 IPR013766 -
Lja1g5217 322 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5217 Lja-Chr1 77787035 77790136 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5217 - - gmx:100815032 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5217 1 77787035 77790136 Lja1g5217 1 77787035 77790136 ECH