Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5161 ATGTCGAGGATCACCAAGTGGAAGATCGAGAAGACAAAAGTGAAGGTGGTTTTCCGGCTGCAATTTCATGCTACACATATTCCACAATCTGGATGGGATAAACTGTTTATCTCTTTCATCCCTGCTGACACTGGGAAGGCTACATCAAAGACTACCAAAGCTAATGTGAGAAATGGAACCTGCAAGTGGGCGGATCCAATCTATGAAACCACAAGACTCCTCCAAGACGTTAAAACACGACAATATGAGGAGAAGCTTTACAAACTTGTTGTGGGGATGGGTTCTTCAAGATCTAGCATCCTTGGCGAGGCCAACATAAATCTGGCTGATTTTGTTGATGCCTTGAAGCCTACAGCTGTTGCTTTGCCTCTTAACGGAAGTGAGCCTGGAATCACACTACATGTCACTGTGCAGCTTCTCACTTCCAAAACTGGTTTCAGAGAATTCGAACAGCAGAGGGAACTCAGAGAGAGGGGACTACAGACAACCTCTGACCAAGGAATTCATGATGAATATGCTGATAGCAAAGAGTCTTCTCCTGACCAGAATGTCAATAATCATATAAATAAGGTCAACCCAAGAGTGAAATTGAGAAGAGAATCTAAAGATCCTCCCCGTATTTCTTCTCTTGAAGGAGAGCCAGGCGCAAATGAAGAGTATGCCGAGTCAGCTGCTGGATTTGATGGCTCTTCTACTACTTCTGAAAGCATTTATACTGAGAAGCATGATGTTTCCAGTACACATGAAGTGGACAGCCTTAAAAGCACCATCTCTGGTGATTTAGGTATACAATCCCTTGGTGAAAGTCCTCAGCCAGGGAAAGGAGATGCTGCTGATAATCAGTTTCCATCACAGGGCAGTGATTGGGTTCATGGTTGGAGCATAGACTATTCAGCTGCCAATAATTTGGCTGCTACTTCTGTAGATAGTAGCAGTAGCAGTCTAAAGGGAAATTTAGAAGCAGTGGAGTCATCTATTCTTGATCTAAAACTGAAGGTGAGCTGTTTACAAAATTATGCTGATGAAATAGGTGTTGCATCAAACAAGTTTTCTGAGCAACTTACTGCTGAGATTTCATCTAGTGAAGAGCTAGCAGAAGAGGTTGCTGCACTAAAATCAGAGTGTTCAAAGTTCAAAGATGAATTTGAGCAGATTAAAAGTTCTAAGACAAGCCTTGCATTTTCTCTTAAAGATACTGAGACAGATCAGGATAAATCATTCCATAATTTACAACTTAAATGGCTTAAGGGGCTTTTTCTCATGGAAGATAAGTTAAGAGATATTCAGAAGGCATATATGGGATCTCCTGAAAGCGATTTTAGGTTCCTTAATTTGGAGTTAGAAGGACTGGTTCAGATTTTGCACGATCTCAAACAAGAATTTGGTGAGCCATTTTCAGGGACCAAAGCTGCCATTGGAAGAGAGAACAAGAAATTGGATTTACATAAAAGTGACCAATTTTTATCAGATATTGGGTCTGTTGCTGGTATATTTCAACCTGAAAGCATGACTCGTTATCTTACTGTTCCTGGCCTTGTGTCTCAGGAGTTTGATTCTGTAGATCCTACACTTGCTATGAAAGAGAAATGTTTTGAACTTCTGAGAGAGCTAGATGAGTCCAAAACCGAAAGGGAAAGCCTTGTGCAGAAAATGGACCAGATGGAGTGCTATTATGAGGCTCTTATTCAGGAGCTTGAGCAGAATCAGAGGCAGATGATGGCTGAGTTGCAGAACCTTAGGAACGAACATTCTACTTGCATTTACACGATTTCGGCTGGTAAAACTGAGATGGAGAGAATGCACCAAAATATGAATGAGCAGATCATGAAATTTTCTGAAGACAAGCGTATTTTGGAATCTCTCAACAGTGAGTTTGAAAGAAGGGCTATTTCTGCAGAAGCAGCCCTTAAAAGGGCTAGATTGAACTATTCTATTGCTGTTGGCCAATTGCAAAAAGATCTCGAGCTTCTTTCTTGTCAGGTTCTTTCTATGCATGAGACAAATGAGAATCTCATGAAGCAGACATTCTCTGATTCTTCACTTCCAAATGCTGATGCCTGCCCAGAACCAGCAAAATATCCTCGAAATTCCGAAGATCATACTTCCAATCGATTGCTATGTCAAAATCACAGTTCTTCCTTACATAGACAACATTTAGGTGAAGACATTTTGCTAAACGATTTGAAAAGATCGCTTCAGTTGCAAGAGGGGTTATACAAACAGGTTGAAGAAGAAATCTTCCAGGTGCATTATGTAAATATATGCTCCGATGTGTTTTCGAAGGCTCTGCAAGAAACATTGCTTCAAGCAAGTCTTGACATTCAACTCATGAAAGAGGAAATTGTTCAACTCTCTCAGAAGCTGGAGCTTACAAATGAATCCAATGAGTTACTGGTGCTGAGGTTGCAGAATGCTACAAACGATATCCTCTCATTAAATGAGTACAAGGAGATTTGCACAGCAAAGAGAAATGCTACTGCTTGCCAGAACCAAATTTTAGAGGCAAATTTAAATGATCTTGCTCGTGAAAACAAACTTCTTTCTCAGAAAATTAGTGAGTTGGAAATTCAACTGACAGAGTATAGAAGCTGTGAGGACAAATATGTGGCATGCAGTGCAGAAAACTCGGAGTTGCAGAGTTTATTGAAAAAAGAGAGCCTAGAAAATAATAATCTTCTTGATAAAATAGCTATTCTGCAGGAAGAGCTAAAAACTGTCGGAGCTGAATCTAAAGAGATGGCTTCTGTGAAGGATAATCTGCAGAACAATGTCAACTTTTTGTCTGATAAGTTGCAGAAATTGATGGTATCACATGCGGATAAATACAATGAACTTTCTCTCTGTAATAGATCTGCTTGTTTTGATTCAGATTACAAAGACCTAGAAGGTCTCCTATTGGGACTAGAAGAGCTGCATCATAGCGCATTTGATAGGATCCTGCTACTCGTTGAAGAGAAGAATATTTTAGAGAATGAAAAGCATATGGCTCAAGTATCTTTAAATACAGCAGAATCAGATCTTGTAGTCATGAAACAGAAGTCTGAGCATGATTTACGAGAGATGCAAAGTAACATAAGTGTGTCTGGTGCCCTATTGCAGAAACTTCAGTCAGATTTCGAGGTTATTGTTGACAGGGTCAATGCTGGTTCTAAAGCTGAAGCAATATACTCTCAGCATCACAATGAATTTTTGTCTGGTCTTGATAATTTGGAAGCCGAGTTACGACAACTTAATTCCAGAAATCAGGACCTTGCTGAAGAAATTGTTAACCTAGGTACTTCATTTAGTGACCTCGAGATGTGTAAATTGACCTTAACAGCAATTACAGAGGAAAAGAAAGCTCTGGAGTTGTCTTTACAGGACAAAACAGAAGAATGTGCCAAGACTTCATCTGAGCTTAATTTTTTGCAAAAGAACATGAATTCTCTGCACAATGATTTGCATGCTGAAAAAATCTTCAGAGAAAAATTGGAGAATACAGTTACAGATCTTACCAAAGAGTTGAATGAGAAGCAAAGCCAGCTGCAGGATTCTGATATGAACAAACAAGAACTGGCTCATCTCAAGAAACAGGTATCAAACTTGGAATTTGAGAAATCAAGAATCTTAGATCTTCTGCAGAAATCTGAGAAATGTCTTAGTGATGCTTTAAAGGAATCTTCTTCTATTAGTTGTCTGGAGACCGACTTATCTGAAATGCATGAATTTTCAATAGCTACTGATGTTGTTGTGATGTTTACCAGAGCTCAGTTTGAGGGTCATATAGAGGAGCTTACTGGAAAACTCTATTCCACTTGCAGGCAACTGGATGTGATTCACCAGAAGAATCTTGATGTAGAATCTGAACTGAATGAGTGTCTTTGTAGAGAATTGACTTACATTGAAGAGAATACAACATTGTTGACGAGTCTTGACTTCCTAAAATCTGAGTTAGAGGTCTTTGCTGCTCAGAGTAGATCACTATTTGATCAAAATAATTCAATAATAACAGAGCTTAAGGAGAAGAGTAGGACAGAGAATGTCAGCGATACTCTTAATGTACGTGAAAGCGAGTGTGTCCTTGAGGTTGCAAGGCTGGAGCAATTGCTGGCAAGTTGTCATAGAGAGGGTGAACAACTCTTTTTGTCCAAGGAAGAAGCTGAACTCAAATGTATAGTTCTCCTGGCCAAATTGGATGAACTGGAAAGTACAATTACTAAACTAAAACAATCAGATAATGAGTTAATAAAGCTGCAGAACCAATGTAATGAGCTTAGCAAGAGGCTTTCTGAACAGGTTTTTAAGACAGAGGAGTTCAAGAATTTGTCTATTCATTTGAAGGAACTGAAAGACAAGGCTGAAGCTGAGTGTCTTAGTGCCCGTGACAAAAGAGGACAGGAAGGACCACCGGTTGCTATGCAGGAGTCCTTGAGAATTGCATTCATCAAGGAACAATATGAAACAAAGTTGCAAGAACTTAAACAGCAACTATCTTTGTCAAAAAAGCATAGTGAGGAAATGCTGTGGAAACTACAAGGTGCGAGTGATGAAATAGAGAATAGAAAAATGTCTGAAGCTTCTCTAATAAAAATTAATGACGAGCTGGGAACTAAGATCTTGGAGTTGGAGGCTGAGTTACAGGCTGTAATTTCTGACAAACGTAATCTGTTAAATGCTTATGACCTGTTAAAGGCTGAAAAAGAGTGCTCAGTGATATCCCTTGAATGCTGTAAACAAGAAAAGCAAGAGCTTGAAGCTTCTCTTTTAAAATGCAATGAGGAGAAGTCCAAAATCGAAGTAGAGCTTACCCTGGTGCAGAAATCGATTGAGACGTTGAAATGTAATGGGAATATTTTGAATGAGGACAATGATATATTATCTTCGTCATTGAATTCTCAATCTCATGAAGCTTGCAGTCATGAAAAGGAGAGTGAAAATTCACTCATCAATATGCAAGTGGAGGATGCTCTTGCATTAAGAGTTATGAACGGATGCCAAACTCTTGGAACTGAAGAGGACTTGCAACAAAATGAGGAAAGGAAGCACATGGCTTTAACTGAAAGTTTGAAATCTAGCATTGATCACTTAAATGAGGAGTTGGAAAGGATGAGAAATGAGAATATGCTTCCTCCAGTAGATGGACATCGCCGTGAGCCATGTTTTCCAGGTCTGCAAAGGGAACTGATGCAGTTACATGAGGCCAATCAAGAGTTAGGAAACAAGTTTCCTGTGTTCAATAAAATCTCAGTCAGCGGTAATGCATTAGAAAGAGTGCTTGCTTTGGAGATTGAGCTAGCTGAAGCATTGCAGGCCAAGAAAAAGTCAAGCATCCAATTTCAGAGTTCTTTCTTGAAACAGCACAGTGACGAAGAAGCGGTGTTCCGAAGCTTCAGGGACATCAATGACCTAATCAAGGACATGTTAGAACTAAAGGCAAGGCATTCGGGTATGGAGACAGAACTGAAAGAGATGCATGACCGTTACTCTCAACTAAGTCTTCAGTTTGCTGAGGTAGAAGGTGAGAGACAAAAACTCATGATGACCCTTAAGAACACTCGAGGATCTAAGAAGTAA 5553 0.3962 MSRITKWKIEKTKVKVVFRLQFHATHIPQSGWDKLFISFIPADTGKATSKTTKANVRNGTCKWADPIYETTRLLQDVKTRQYEEKLYKLVVGMGSSRSSILGEANINLADFVDALKPTAVALPLNGSEPGITLHVTVQLLTSKTGFREFEQQRELRERGLQTTSDQGIHDEYADSKESSPDQNVNNHINKVNPRVKLRRESKDPPRISSLEGEPGANEEYAESAAGFDGSSTTSESIYTEKHDVSSTHEVDSLKSTISGDLGIQSLGESPQPGKGDAADNQFPSQGSDWVHGWSIDYSAANNLAATSVDSSSSSLKGNLEAVESSILDLKLKVSCLQNYADEIGVASNKFSEQLTAEISSSEELAEEVAALKSECSKFKDEFEQIKSSKTSLAFSLKDTETDQDKSFHNLQLKWLKGLFLMEDKLRDIQKAYMGSPESDFRFLNLELEGLVQILHDLKQEFGEPFSGTKAAIGRENKKLDLHKSDQFLSDIGSVAGIFQPESMTRYLTVPGLVSQEFDSVDPTLAMKEKCFELLRELDESKTERESLVQKMDQMECYYEALIQELEQNQRQMMAELQNLRNEHSTCIYTISAGKTEMERMHQNMNEQIMKFSEDKRILESLNSEFERRAISAEAALKRARLNYSIAVGQLQKDLELLSCQVLSMHETNENLMKQTFSDSSLPNADACPEPAKYPRNSEDHTSNRLLCQNHSSSLHRQHLGEDILLNDLKRSLQLQEGLYKQVEEEIFQVHYVNICSDVFSKALQETLLQASLDIQLMKEEIVQLSQKLELTNESNELLVLRLQNATNDILSLNEYKEICTAKRNATACQNQILEANLNDLARENKLLSQKISELEIQLTEYRSCEDKYVACSAENSELQSLLKKESLENNNLLDKIAILQEELKTVGAESKEMASVKDNLQNNVNFLSDKLQKLMVSHADKYNELSLCNRSACFDSDYKDLEGLLLGLEELHHSAFDRILLLVEEKNILENEKHMAQVSLNTAESDLVVMKQKSEHDLREMQSNISVSGALLQKLQSDFEVIVDRVNAGSKAEAIYSQHHNEFLSGLDNLEAELRQLNSRNQDLAEEIVNLGTSFSDLEMCKLTLTAITEEKKALELSLQDKTEECAKTSSELNFLQKNMNSLHNDLHAEKIFREKLENTVTDLTKELNEKQSQLQDSDMNKQELAHLKKQVSNLEFEKSRILDLLQKSEKCLSDALKESSSISCLETDLSEMHEFSIATDVVVMFTRAQFEGHIEELTGKLYSTCRQLDVIHQKNLDVESELNECLCRELTYIEENTTLLTSLDFLKSELEVFAAQSRSLFDQNNSIITELKEKSRTENVSDTLNVRESECVLEVARLEQLLASCHREGEQLFLSKEEAELKCIVLLAKLDELESTITKLKQSDNELIKLQNQCNELSKRLSEQVFKTEEFKNLSIHLKELKDKAEAECLSARDKRGQEGPPVAMQESLRIAFIKEQYETKLQELKQQLSLSKKHSEEMLWKLQGASDEIENRKMSEASLIKINDELGTKILELEAELQAVISDKRNLLNAYDLLKAEKECSVISLECCKQEKQELEASLLKCNEEKSKIEVELTLVQKSIETLKCNGNILNEDNDILSSSLNSQSHEACSHEKESENSLINMQVEDALALRVMNGCQTLGTEEDLQQNEERKHMALTESLKSSIDHLNEELERMRNENMLPPVDGHRREPCFPGLQRELMQLHEANQELGNKFPVFNKISVSGNALERVLALEIELAEALQAKKKSSIQFQSSFLKQHSDEEAVFRSFRDINDLIKDMLELKARHSGMETELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNTRGSKK* 1851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5161 1850 MobiDBLite consensus disorder prediction 155 281 - -
Lja1g5161 1850 MobiDBLite consensus disorder prediction 226 240 - -
Lja1g5161 1850 Coils Coil 1154 1181 - -
Lja1g5161 1850 Coils Coil 823 857 - -
Lja1g5161 1850 Coils Coil 1060 1094 - -
Lja1g5161 1850 Coils Coil 1679 1699 - -
Lja1g5161 1850 Coils Coil 1377 1421 - -
Lja1g5161 1850 Coils Coil 594 614 - -
Lja1g5161 1850 Coils Coil 361 381 - -
Lja1g5161 1850 Coils Coil 875 909 - -
Lja1g5161 1850 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Lja1g5161 1850 MobiDBLite consensus disorder prediction 155 177 - -
Lja1g5161 1850 MobiDBLite consensus disorder prediction 250 265 - -
Lja1g5161 1850 PANTHER SPORULATION-SPECIFIC PROTEIN 1 1850 - -
Lja1g5161 1850 Coils Coil 917 937 - -
Lja1g5161 1850 Coils Coil 1525 1552 - -
Lja1g5161 1850 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 140 IPR019448 -
Lja1g5161 1850 Coils Coil 544 582 - -
Lja1g5161 1850 Coils Coil 725 745 - -
Lja1g5161 1850 Coils Coil 1105 1146 - -
Lja1g5161 1850 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 1850 - -
Lja1g5161 1850 Coils Coil 1476 1496 - -
Lja1g5161 1850 Coils Coil 767 794 - -
Lja1g5161 1850 Coils Coil 622 642 - -
Lja1g5161 1850 Coils Coil 1567 1594 - -
Lja1g5161 1850 MobiDBLite consensus disorder prediction 676 701 - -
Lja1g5161 1850 MobiDBLite consensus disorder prediction 193 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5161 Lja-Chr1 75476835 75495461 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5161 - - lja:Lj0g3v0302039.2 2253.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5161 1 75476835 75495461 Lja1g5161 1 75476835 75495461 ECH