Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5158 ATGGTTCATGCTCATAGTGCTCTAAAACTAACATCAAGTAGATTCTTCTACAACCCTAGGGGAGTTCTCGGTTTACTCACTGCTATTGGTGGTTGTGTCTGTCATTCAGGATTTTGTTCAATGACACAAATCAATTCTGAAGTGGGTTCTAGTTTATGTAGTATTCTTGCCCCAAATGGGGAACCCTGCATCACAGATTCCTCATCAGTAGTTGAGAACCCTACCACTTCGTCGGTGAGCGTGCGGTCTACCCCTGAAATTGAAAAGAAGTTTGTTCATCATGTTTATGATGCTATTGCGCCGCATTTCAGTTCCACTCGGTTTGCCAAGTGGCCAAAGGTTGCCTCTTTTTTGTCATCTTTGCCTTCAGGATCTCTTGTCCTGGATGCGGGATGCGGGAATGGGAAGTACTTGGGTTTAAATCAAGATTGTTTTTTTATTGGATGTGATATAAGTCCTTCGTTGATTAAAATATGCTCAGATAGAGGACATGAAGTTATGGTTGCAGATGCAGTGAATCTTCCTTACAGAACTGGTTTTGGTGATGCGGCAATATCTATAGCTGTGTTACATCATTTGAGCACTGAGAATCGAAGGAGAAAAGCAATAGAAGAGTTAGTCCGAGTTGTTAAAAAGGGTGGCCTTGTTCTTATTACAGTTTGGGCTGTAGAACAAGAGGATAAATTGCTGGTCACCAAATGGACTCCGCTTGCAGAAAAAAATCTTGAAGAGTGGCCAGAACCTGGAAATCATTGTGCTCGGGTTCCTTCATTTTCATCATTGGAAAGTATTCCAGAAAGTGAGGAGAGTAGCTCGGTTGAGCACGTTAAAGTTTGCAATGAGTCAAAATCATCAAGTGATTTGAATGAAGAAAAAAAATTGAAGAATCAACAGGAGTATTTTGTTCCTTGGCATTTACCTTATCATCGTGCAGAAATCAGTGGTTCTTCTGCAGATGCTCTTGCTACTGGTCTTGCAACTAAAGATGACAAAAAGGGGGCTGTAGTGTACAATAGATATTATCATGTTTTTAGTCAAGGCGAGCTTGAAAGTTTGGCAAATGGAATAAACAATGCAAGAGTTGTTGATCAGTTTTTTGATAAATCCAACTGGTGTATTATTCTAGAGAAGACATGA 1137 0.4028 MVHAHSALKLTSSRFFYNPRGVLGLLTAIGGCVCHSGFCSMTQINSEVGSSLCSILAPNGEPCITDSSSVVENPTTSSVSVRSTPEIEKKFVHHVYDAIAPHFSSTRFAKWPKVASFLSSLPSGSLVLDAGCGNGKYLGLNQDCFFIGCDISPSLIKICSDRGHEVMVADAVNLPYRTGFGDAAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQEDKLLVTKWTPLAEKNLEEWPEPGNHCARVPSFSSLESIPESEESSSVEHVKVCNESKSSSDLNEEKKLKNQQEYFVPWHLPYHRAEISGSSADALATGLATKDDKKGAVVYNRYYHVFSQGELESLANGINNARVVDQFFDKSNWCIILEKT* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5158 378 PANTHER BNAA05G09210D PROTEIN 77 372 - -
Lja1g5158 378 Gene3D Vaccinia Virus protein VP39 103 378 IPR029063 -
Lja1g5158 378 CDD AdoMet_MTases 127 223 - -
Lja1g5158 378 PANTHER UNCHARACTERIZED 77 372 - -
Lja1g5158 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 76 245 IPR029063 -
Lja1g5158 378 Pfam Methyltransferase domain 128 218 IPR013216 GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5158 K10770 - gmx:100784028 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5158 1 75406747 75412956 Lja1g5158 1 75406747 75412956 ECH