Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5143 ATGGCTAAAGTTGGTAAGATGCGGTGCAAGTCCCAAACTCGAGGTCACAGGGAAACCCCATATCTTTTATCTTGTGCAAGAAAAAATCCGAAAAGTATTAAAGTAAAGAAAGGCTTTTCTAAAGCATCAGAAAAGAAAGATTGGAAAGATGCAACCTGCTCAGTCTGTATGGAGGTCCCCCACAATGCTATCCTTCTCCTTTGTTCATCATATAACAAGGGTTGTCGTCCTTATATGTGTGCTACAAGCCATCGCTATTCGAACTGTTTTGAACAGTATAAAAAGGCATACACGAAAGCAACATCTGTTCAAGAAACAGATGATCCAAATTTTGATTTAGGTGCAGGTGATCCTAATGACAATACAAAAGTTCCTGAACTTCTTTGCCCCCTTTGTCGCCGGCAGGTGAAGGGATGGACAGTGGTTGAAGCAGCCCGGAAGTCTATGAATGCCAAGAAAAGAAGCTGTATGAAAGATGATTGCTCTTTTGTGGGGAACTACAAGGAGCTTAGGAAGCATGTTAGGTCTATGCATCCATTTTCACGACCACGAGAGGTGGATCCTGTACGAGAAGAAAAATGGAAGAGATTTGAGGGTGAAAGAGAAAGGAGTGATGTGATCAGTACAATTTTATCTTCAACACCTGGTGCTATGGTACTGGGGGATTATGTGCTTGAGCCAAATGACCATGCTTTTTACAGTGATGAGTATGATTCTGATTCTGATGAGGAATATTTGGAGGATGATTTTTTCTCCATGAGGACCATTGGTTTGGGGAGTACTAGCCGCTTTTTGTCAAATATTAGGTATAACCAGATTCAGGGTCATGCTGCTGATTCTTTTGATGTTGATCATTTTGGTTTGCGGAGTGTTGCATCTACAGGTTCTGCTGCTGCCTCTGGACGTGGAATCCACAGGCTGCTGTTTGAAAGGTCTCGAAGAAGACGGAGGCATAGGATACCAGGCAGGTAA 972 0.427 MAKVGKMRCKSQTRGHRETPYLLSCARKNPKSIKVKKGFSKASEKKDWKDATCSVCMEVPHNAILLLCSSYNKGCRPYMCATSHRYSNCFEQYKKAYTKATSVQETDDPNFDLGAGDPNDNTKVPELLCPLCRRQVKGWTVVEAARKSMNAKKRSCMKDDCSFVGNYKELRKHVRSMHPFSRPREVDPVREEKWKRFEGERERSDVISTILSSTPGAMVLGDYVLEPNDHAFYSDEYDSDSDEEYLEDDFFSMRTIGLGSTSRFLSNIRYNQIQGHAADSFDVDHFGLRSVASTGSAAASGRGIHRLLFERSRRRRRHRIPGR* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5143 323 PANTHER BNAC03G28140D PROTEIN 1 319 - -
Lja1g5143 323 Pfam Protein of unknown function (DUF1644) 50 208 IPR012866 -
Lja1g5143 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 181 IPR013083 -
Lja1g5143 323 PANTHER OS01G0612600 PROTEIN 1 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5143 Lja-Chr1 74633912 74640349 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5143 - - gmx:100812579 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5143 1 74633912 74640349 Lja1g5143 1 74633912 74640349 ECH