Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5102 ATGGCTTCTGAGAAGGTTGAGACTGTGGTTGCAGGAAATTACTTAGAAATGGAGAGGGAAGAGGAGGATTCTAAGTCTGCTGCTAGCAAACTATCAAAGTTTTTCTGGCATGGTGGCTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTTCTAACATTACCATATTCCTTTTCACAACTGGGGATGTTGTCTGGGATTCTGTTTCAACTTTTTTATGGACTCATGGGAAGCTGGACTGCTTACCTTATCAGTGTCCTCTATGTTGAGTACAGAACCAGAAAGGAGAGGGAAAAAGTTGATTTTAGAAACCATGTTATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGCAAACACTGGAGGAATCTTGGTCTCTTCTTCAACTGTACTTTCCTTCTATTTGGATCAGTAATTCAGTTAATTGCCTGTGCAAGTAACATATACTACATAAATGACAATTTGGACAAGAGAACTTGGACTTACATATTTGGAGCCTGCTGTGCCACAACAGTATTCATTCCTTCTTTCCACAATTACAGAATCTGGTCATTCTTGGGACTCGTGATGACCACTTACACTGCATGGTACATGACCATAGCCTCCCTTGCCCATGGACAGATTGAGGGGGTGAAGCACTCAGGGCCCACCAAATTGGTACTCTACTTCACTGGGGCTACCAACATTCTCTACACTTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAAAAGTTTAAGATGATATATCTGATAGCAACACTATACGTGCTGACTCTGACTTTGCCATCAGCAGCAGCAGTTTATTGGGCATTTGGAGACATGCTTCTCACACATTCTAATGCACTCTCATTGCTCCCTAAGACAAGGTTCAGAGATTCTGCTGTCGTTCTCATGCTCATTCACCAGTTCATAACATTTGGATTTGCTTGCACTCCTTTATACTTTGTGTGGGAGAAATTCCTTGGGGTGCATGAAACCAAGAGTTTGTTGAAAAGAGCTTTGACTAGACTCCCTGTGGTGATTCCAATATGGTTCTTAGCAATCATATTCCCTTTCTTTGGCCCCATTAACTCAACTGTTGGATCTCTCCTTGTCAGCTTCACCGTTTACATTATCCCTGCCTTGGCACACATGGTCACCTTTGCTTCAGCACCAGCTAGAGAGAATGCTGTGGAGAGACCACCATCAATTGTAGGAGGGTGGGTAGGATTATACTCCATGAACGTGTTTGTGGTGGTATGGGTTTTGGTGGTGGGATTTGGGTTGGGAGGATGGGCGAGCATGGTTAATTTCATACGCCAAGTTAACACATTTGGGCTGTTTGCCAAGTGCTATCAGTGTCCCCCTCACAAGGCCTAA 1398 0.4349 MASEKVETVVAGNYLEMEREEEDSKSAASKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYMTIASLAHGQIEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVLTLTLPSAAAVYWAFGDMLLTHSNALSLLPKTRFRDSAVVLMLIHQFITFGFACTPLYFVWEKFLGVHETKSLLKRALTRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSIVGGWVGLYSMNVFVVVWVLVVGFGLGGWASMVNFIRQVNTFGLFAKCYQCPPHKA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5102 465 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Lja1g5102 465 PANTHER OS05G0424000 PROTEIN-RELATED 3 460 - -
Lja1g5102 465 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 3 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5102 Lja-Chr1 73561555 73565045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5102 1 464 Organic Solute Cotransporters AT1G77690 87.420 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5102 K13946 - gmx:100815243 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5102 1 73561555 73565045 Lja1g5102 1 73561555 73565045 ECH