Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5093 ATGGAAGTGGAGCGAATACAAACCTTAGCGCTTAACCACCAGCTGAAAGAGCTTCCACCACAGTTCATTCGCCCCGCTAACGAACGGCCAGAAAATACAAAAGCTGTGAAGGATGTCACATTACCTGTTATATCTTTGTCTCTGCCACACCATGTTTTGGTGAAGAAGGTTACGGAAGCTGCATCCGAGTGGGGATTTTTTATCATTACCGACCATGGTATGTCGCCGACACTCATCCAACGTTTGCAAGAGGTGGGTCAAGCGTTCTTTGCTCGTCCTCAGGAGGAGAAAGAGGCATATGCGAATGACCCCTCCAAGGGTAACTTTGATGGGTATGGCACCAAGATGACCAAGAACCTTGAAGAAAAGGTTGAGTGGGTGGACTACTATTTTCACGTCATGAGTCCTCCTTCTAAGGTCAACTATGACATGTGGCCCAAAAGCCCTCCTTCCTACAGGAAGGTAACACAAGAATACAATAAGGAGATATTAAGGACAACTGAAAAGATTTTGGAGCTCTTATCTGAAGGGCTGTCACTGGAAAGGAAGGTTTTAAAGTCTTGCTTGGGAGATAAGGAAATAGAACTAGAAATGAAGATAAATATGTATCCACCATGCCCACAGCCTGAATTGGCATTGGGAGTTGAACCCCACACTGACATGAGTGCCCTTACCTTACTTGTTCCGAACATTGTTCCCGGCCTCCAAGTTTGGAATGGAAATAACTGGGTTGAAGTCAATTACTTGGAAAATGCACTCTTTGTGCACATTGGTGATCAACTTGAGGTGATGAGTAATGGGAAGTACAAGAGTGTTCTGCATAGAAGCTTGGTGAACAAGGAGCATACACGGATGTCATGGGCTGTATTCGTTGTGCCACCACATGATGCGGTTATCGGGCCCCTTCCTCAACTCATCAATGATCAAAATCCTCCCAAGTTTTCAACAAAAACCTATGCTGAGTACCGCTATCGCAAATTCAATAAGCTTCCACAATAG 999 0.4494 MEVERIQTLALNHQLKELPPQFIRPANERPENTKAVKDVTLPVISLSLPHHVLVKKVTEAASEWGFFIITDHGMSPTLIQRLQEVGQAFFARPQEEKEAYANDPSKGNFDGYGTKMTKNLEEKVEWVDYYFHVMSPPSKVNYDMWPKSPPSYRKVTQEYNKEILRTTEKILELLSEGLSLERKVLKSCLGDKEIELEMKINMYPPCPQPELALGVEPHTDMSALTLLVPNIVPGLQVWNGNNWVEVNYLENALFVHIGDQLEVMSNGKYKSVLHRSLVNKEHTRMSWAVFVVPPHDAVIGPLPQLINDQNPPKFSTKTYAEYRYRKFNKLPQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5093 332 SUPERFAMILY Clavaminate synthase-like 9 329 - -
Lja1g5093 332 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE-LIKE 3 332 - -
Lja1g5093 332 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 293 IPR005123 -
Lja1g5093 332 Gene3D - 1 330 IPR027443 -
Lja1g5093 332 Pfam 2OG-Fe(II) oxygenase superfamily 200 291 IPR044861 -
Lja1g5093 332 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 332 - -
Lja1g5093 332 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 147 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5093 Lja-Chr1 73211639 73219114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5093 11 329 Glycosyltransferase AT5G59530 31.657 2.51e-50 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5093 K05278 - gmx:100810937 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5093 1 73211639 73219114 Lja1g5093 1 73211639 73219114 ECH