Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5084 ATGCAGGTCTACAGAACCTGCACCTGCCCTCATTTGGGGTCGAGATTCATGCCTTCCTCCAAACTACTACTATCATTAAACTTTACAAATCATTTCATCACACCCTCTAATCTTCCAACCCCAAAGTTCCCATCTTCGATTGCAGCCACCATGTCCACCACTGTTTCCACCCAGAATGACACCACTGCCCAGAAGACGCATCATCCTGTGCAGGTTGCAAAGCGCTTGGAGAAGTTCAAAACAACAATCTTCACCCAAATAAGCACGCTTGCTGTCAAACATGGAGCCATAAACCTTGGTCAGGGCTTCCCCAACTTTGATGGGCCAGAATTTGTAAAGGAAGCTGCTATTCAGGCAATCAGGGACGGGAAAAATCAGTATGCCAGGGGTTATGGAGTTCCTGACCTGAACATTGCCATTGCTGAGAGATTTAAGAAAGATACTGGACTAGATGTAGACCCTGAAAAGGAAGTTACTGTTACATCTGGATGCACAGAAGCAATAGCTGCAACCATGTTAGGATTAATAAATCCTGGTGATGAGGTTATCCTATTTGCTCCTTTTTATGATTCTTATGAAGCAACTTTATCCATGGCTGGTGCTAAAGTAAAAAGCATCACTCTGCGCCCTCCGGATTTTGCTGTCCCGATTGAAGAGTTGAGATCCACTATCTCAAAGAACACCCGTGCCATTCTTTTAAATACCCCTCACAACCCTACTGGAAAGATGTTCACTAGAGAGGAACTCAATACCATTGCATCTCTTTGTATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTTTATGATAAATTGGCATTTGATATGGAGCACATTTCGTTGGCTTCTTTGCCTGGAATGTTTGAAAGGACAGTGACAATGAACTCCTTGGGGAAGACATTCTCCTTGACAGGGTGGAAGATCGGGTGGGCAATAGCACCACCACACTTAACATGGGGAGTGCGGCAAGCGCATGCTTTTCTCACATTCGCAACCTCCAATGCTAACCAATGGGCTGCTGCGGTGGCTCTTCGAGCACCGGATTCTTACTTTGTTGATCTAAAGAGGGATTATCTGGCGAAAAGAGCTATTTTGGTGGAAGGATTGAATGCTGTTGGCTTCAAGGTGTTCCCATCCAGTGGAACTTACTTTGTGGTTGTAGATCACACCCCTTTTGGACATGAAAATGATGTTGCATTCTGTGAATATCTTATTAAGGAGGTGGGAGTGGCAGCGATCCCGACTAGTGTGTTTTACTTGAATCCAGAAGAGGGAAAGAATCTGGTCAGATTTACTTTCTGCAAGGATGAGGAAACTCTTAGGGCTGCTGTTGAGAGGATGAAGGAGAAGCTTAGAAAATGA 1362 0.4449 MQVYRTCTCPHLGSRFMPSSKLLLSLNFTNHFITPSNLPTPKFPSSIAATMSTTVSTQNDTTAQKTHHPVQVAKRLEKFKTTIFTQISTLAVKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNIAIAERFKKDTGLDVDPEKEVTVTSGCTEAIAATMLGLINPGDEVILFAPFYDSYEATLSMAGAKVKSITLRPPDFAVPIEELRSTISKNTRAILLNTPHNPTGKMFTREELNTIASLCIENDVLVFTDEVYDKLAFDMEHISLASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFATSNANQWAAAVALRAPDSYFVDLKRDYLAKRAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGHENDVAFCEYLIKEVGVAAIPTSVFYLNPEEGKNLVRFTFCKDEETLRAAVERMKEKLRK* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5084 453 PANTHER FI04487P 72 453 - -
Lja1g5084 453 PANTHER FI04487P 72 453 - -
Lja1g5084 453 SUPERFAMILY PLP-dependent transferases 72 452 IPR015424 -
Lja1g5084 453 Pfam Aminotransferase class I and II 97 446 IPR004839 GO:0009058|GO:0030170
Lja1g5084 453 Gene3D Aspartate Aminotransferase, domain 1 86 447 IPR015422 GO:0003824
Lja1g5084 453 Gene3D - 109 347 IPR015421 GO:0003824
Lja1g5084 453 CDD AAT_like 97 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5084 Lja-Chr1 72928463 72931114 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5084 K23977 - gmx:100814682 772.696