Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5083 ATGGAAACAACTCAAAAGAGCCAAACAAAGCTAACACGAACCCAATCCTCATTACTCGTTTCTTCATCCCCAACTCTCCGATCTTCCATTCACAACTTCTCCTCCATCATAATCAAAGACGAACAGCAACAACACGTGGCAGCGGCGTCTTCACACCGCCACGAAGAAGCAGACAACGATGACAAGAAAACCAAGAAACCCCTCATCAACCCGACCCGGAGTCACAAATGGATCCACTATCCCACCGGGTCGACCCGGTTATCCAACCCGATTCTCGCGGTGGTTTCGTTCGGTTTCCTCGGCGCGTGCTCGCTCTGGTTCTACATACAAACCGGCGAGGTGAGACCCACCTCGGAGAACGTGCTGCTCGCGTTGATCTTCGTCGCCGTCGCGCTCTACTTCGCTTCCCGGAACAAACGCCTCATCCACCACGCGGTGTCGTTAGTCAAGGTGAGGCGGTTCGGGTTCGGGTTTGGATTCTGCAAATCGCCGGCGAAGCCGGTGCAGTGGTTCATCGGGGACTCCGACGGCGACGGCGAAGGCGACGGCAAGCCGTCGCCGGCGGTGAGGGAGGGGGTGGAGTTTTACAGCAATGGGGATTTCTACGAAGGGGAGTTTCACAGAGGGAGGAGCAATGGGAGCGGGGTGTACAATTACTTTGTGAATGGGAGATACGAAGGGGATTGGATCGATGGGAGGTACGATGGGTATGGAATTGAGAGCTGGGCGAGGGGGAGTCGCTATAGGGGACAGTACAGGCATGGGTTGAGGCATGGTTATGGGGTTTACAGGTTCTACACTGGGGATTCTTATTCTGGTGAGTGGTTTAATGGTCAGAGCCATGGATTTGGAATGCAAACTTGCTCTGATGCTAGCACTTACATTGGTCACTTCAAACATGGTGTTAAGCATGGCCTTGGTTGTTACCATTTTAGGAATGGGGATCAATATGCGGGAGAGTACTTTGGAGACAAAATACACGGATTTGGGGTCTACCACTTTGCCAATGGCCATTATTATGAAGGAGCATGGCATGAGGGGCGTAGGCAAGGTATCGGCGCATATATTTTCCGAAACGGTGACCGAAGGTGTGGTGAATGGGATGCTGGCAACCTCAAGCATCCTCTACCACCACTTGCTGAAGTTGTACTTCGCGCAGTTCAGGCTGCTAGGAAAACAGCAGAGAATGCTATAAACCTCAAGCGCGTTGATGACCAGGTTAACAAAGCAGTGATCGCTGCTAACAAGGCTGCCACTGCTGCTAGAGTTGCTGCAGTGAAAGCTGTTCAGAACAGAATGGATGGAAAATTTTGTGAGACTGATGTCTATGAGTTAGATGTTTAG 1344 0.5171 METTQKSQTKLTRTQSSLLVSSSPTLRSSIHNFSSIIIKDEQQQHVAAASSHRHEEADNDDKKTKKPLINPTRSHKWIHYPTGSTRLSNPILAVVSFGFLGACSLWFYIQTGEVRPTSENVLLALIFVAVALYFASRNKRLIHHAVSLVKVRRFGFGFGFCKSPAKPVQWFIGDSDGDGEGDGKPSPAVREGVEFYSNGDFYEGEFHRGRSNGSGVYNYFVNGRYEGDWIDGRYDGYGIESWARGSRYRGQYRHGLRHGYGVYRFYTGDSYSGEWFNGQSHGFGMQTCSDASTYIGHFKHGVKHGLGCYHFRNGDQYAGEYFGDKIHGFGVYHFANGHYYEGAWHEGRRQGIGAYIFRNGDRRCGEWDAGNLKHPLPPLAEVVLRAVQAARKTAENAINLKRVDDQVNKAVIAANKAATAARVAAVKAVQNRMDGKFCETDVYELDV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5083 447 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 21 435 - -
Lja1g5083 447 Pfam MORN repeat 271 290 IPR003409 -
Lja1g5083 447 Pfam MORN repeat 294 315 IPR003409 -
Lja1g5083 447 Pfam MORN repeat 225 247 IPR003409 -
Lja1g5083 447 Pfam MORN repeat 317 338 IPR003409 -
Lja1g5083 447 Pfam MORN repeat 202 219 IPR003409 -
Lja1g5083 447 Pfam MORN repeat 248 269 IPR003409 -
Lja1g5083 447 Pfam MORN repeat 340 362 IPR003409 -
Lja1g5083 447 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 242 370 - -
Lja1g5083 447 MobiDBLite consensus disorder prediction 47 68 - -
Lja1g5083 447 Gene3D - 277 322 - -
Lja1g5083 447 Gene3D - 323 382 - -
Lja1g5083 447 Gene3D - 232 276 - -
Lja1g5083 447 Gene3D - 189 231 - -
Lja1g5083 447 PANTHER HISTONE H3 K4-SPECIFIC METHYLTRANSFERASE SET7/9 FAMILY PROTEIN 21 435 - -
Lja1g5083 447 SMART morn 200 222 IPR003409 -
Lja1g5083 447 SMART morn 338 359 IPR003409 -
Lja1g5083 447 SMART morn 246 267 IPR003409 -
Lja1g5083 447 SMART morn 223 244 IPR003409 -
Lja1g5083 447 SMART morn 269 290 IPR003409 -
Lja1g5083 447 SMART morn 315 336 IPR003409 -
Lja1g5083 447 SMART morn 292 313 IPR003409 -
Lja1g5083 447 MobiDBLite consensus disorder prediction 47 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5083 Lja-Chr1 72902320 72904755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5083 185 372 Acyl Lipid Metabolism Gene Families AT1G21980 35.106 3.80e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5083 - - gmx:100818442 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5083 1 72902320 72904755 Lja1g5083 1 72902320 72904755 ECH