Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5081 ATGGGTCTCTCAAAGGAACAACTTCTAGCACGGTTACAGGAGCTTCAAATTGAATTTTCCAAGTATGAGCATCCAGTTGTTTTGACTGTTGAAGCCCAGGCAAAATATGTTGGAAATTTAGGGGGTGGCCTGAGTAAAAATTTATTTTTGAAGGACAAGAAAAACAGGTTTTATGTTGTTTCTGCCTTAGCTGATACCAGGGTAGATCTCAAAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTTTGAGAATGGCACCCGAAGAGGCTTTAGGTGAAATACTTCAGGTACCCTTGGGTTCTGTCACTCCATTTGCAGTAGTAAATGAATCTGCACGAGATGTTTCACTGTTATTGGATCAAGGATTCAAGACACAACCGCATTGCTTCTTCCATCCACTGTCAAATGACATGTCTATATCTCTAAATGCACGTGATCTTGACATATTTATTAAATCAATAGGAAGAGATCCCTCATATGTTGATTTAGAGGCCAATCCTACGGTGGGTAAAGATCAACCCCCTGATCTAGCTGCACTAGTTCCATCCGGTTCAATAGCTTTGCCTGATCAAGCAGAAAAACAATCATCTTCACAAGTTCCTAAGGAAGGAAACCCTGTTTCTGTTGGTAATAAATCCAAGACGGTTTCAGCCAAAGTTGTTAAGCCATCCGCTGTTGGGAACAATACAAAAGGAACACCGGTCAACAGTGTTCGTTCATCAGGGTATGCAGATGTTGGGCAATTTGTAGAGGAGATATTGCATAAAACATCGGAGTTATTGCTTTCAGAGATCAAGGAAGAAACTATAGGTCTACACGGAGAGCATCTGAGTACTGTGGTATGCGACAAATTACAGAAAAACCTCAACTCAGATCTTAAAAATCTTGCTATGATATTTAAGAACACTGCATACACAGAAGGGTTCCATGCTGGTACTCAGCATCAGCCCAGGCGCTAG 963 0.4154 MGLSKEQLLARLQELQIEFSKYEHPVVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRFYVVSALADTRVDLKVLSQRLGLGKGGLRMAPEEALGEILQVPLGSVTPFAVVNESARDVSLLLDQGFKTQPHCFFHPLSNDMSISLNARDLDIFIKSIGRDPSYVDLEANPTVGKDQPPDLAALVPSGSIALPDQAEKQSSSQVPKEGNPVSVGNKSKTVSAKVVKPSAVGNNTKGTPVNSVRSSGYADVGQFVEEILHKTSELLLSEIKEETIGLHGEHLSTVVCDKLQKNLNSDLKNLAMIFKNTAYTEGFHAGTQHQPRR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5081 320 CDD PrdX_deacylase 5 162 - -
Lja1g5081 320 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 319 IPR040285 -
Lja1g5081 320 SUPERFAMILY YbaK/ProRS associated domain 4 164 IPR036754 GO:0002161
Lja1g5081 320 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 1 319 - -
Lja1g5081 320 Gene3D - 2 171 IPR036754 GO:0002161
Lja1g5081 320 MobiDBLite consensus disorder prediction 191 215 - -
Lja1g5081 320 Pfam Aminoacyl-tRNA editing domain 24 148 IPR007214 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5081 Lja-Chr1 72867653 72875905 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5081 - - lja:Lj0g3v0150309.2 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5081 1 72867653 72875905 Lja1g5081 1 72867653 72875905 ECH