Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5071 ATGGCAGAAGAGAGTGAGACGAAGAAGACGAAGGAGCTAGAGGATACTAATGATGTCGAGTCCCAGATTCAAACCGCTATGAGCTCTCGCGTCCCTTACTTCAAGGAACAATCCGATTCATTGACATTTGAGGGTGTTCGTCGAGTGCTCGAGAAGGATTTGGGGTTGGAGGAATTTGCTTTGGATGTGCATAAGAGATTTATCAAACAATGTTTGATTAAGTGCTTGGAAGGGGTCGGTGAGGAAGATGGCCCAAAGATGCCAGGGGAGGAGGCAGCGGAAAAAGGTGCAAGTACACGTGAGTCAGTAAGACCAAAAGAAGAAGGCCAGTCAGAAGATGTAAAGGATCTTTGCCCTGAAGATGAGGAGAAAATGGAAGACTCGCCAGTATTAGGCCTTCTTAAAGAACAAAAGGGAGTTAAAGTTGAAACCTTCGAACAAGAATACAATGGAAAAAAAATAGTTCTGAGTGAGGCCCAAATTAAGAAAGCTGTTAGGAAAAGATCTTCATATATCAAGTCTAATGCAGAGGAAATTACTATGGCTGGTCTACGGAGACTATTGGAGGCAGATCTTAAACTTGAGCCATATACTCTTGATCCCTTTAAGAAGTTTATAAGTCAACAGCTTGATGAGGTATTAGCTTCTTCTGAAGTTCTTAAACCTGCGAGCAATGCAAAGAAAATTGTTAAGAAGAAACCTGCTACCAAAGTAACTAAAAAGGCCAGCAGTGAAGAGAACTCTGATACTTCTGACAAGGTGAGTGACGAGGAAGAGAATGAGGAAGATGAAGTCAAACCTAGAAAAAAGATTGTTCCAAAAGGCAAGACACAGACTTCTCTTGGACCCAAAAAGCGTAAAGGAGAGGAGACCAATCTATCCAGTAAGAAAAAGCTGAAGACTGCTAAAGCAGCCTCAGAAGACAATAGTGATACAGAAGATAATGAAAAAAACTCTGAAGATGATGAGCCCCATTCATCGCCTGAGAAACTTACCAAGAAGAAAGAGGTTCCAACTCCTGTGTATAGTAAACGTGTGGAGCGCTTAAAATCTGTTATTAAAGAATGTGGAATGAGTGTTCCTCCAGTTATTTATAAAAAGGTCAAGCAGGTGCCTGAAAACAAACGGGAAGGGCAACTAATTAAAGAGTTGGAGGAAATACTGTCTAGAGAGGGGTTATCTTCAAATCCATCGGAAAAGGAAATCAAGGAAGTGAGAAGGAAGAAAGCAAGAGCCAAAGAGCTTGAGGGTATTGATATGAGTAATATTGTTTCAAGTTCACGCCGAAGGTCAACAACTAGTTATGCAGCTCCTCCACCACCAAAGCCCAAGATTCCAGTTAAAGCTAGTGGCGATGATAATGAGGGTAGTGGTAAGGATAACGATGATGAAGGAAATGATAATGAAGTTGATGAAGAAGATGAAGAAGAGGAGGATAGTAATGATGATGATGATGGGAGTGAGAGTGAAGAATTTAACGATGATGAAGAGGACAGTGATTGA 1503 0.4125 MAEESETKKTKELEDTNDVESQIQTAMSSRVPYFKEQSDSLTFEGVRRVLEKDLGLEEFALDVHKRFIKQCLIKCLEGVGEEDGPKMPGEEAAEKGASTRESVRPKEEGQSEDVKDLCPEDEEKMEDSPVLGLLKEQKGVKVETFEQEYNGKKIVLSEAQIKKAVRKRSSYIKSNAEEITMAGLRRLLEADLKLEPYTLDPFKKFISQQLDEVLASSEVLKPASNAKKIVKKKPATKVTKKASSEENSDTSDKVSDEEENEEDEVKPRKKIVPKGKTQTSLGPKKRKGEETNLSSKKKLKTAKAASEDNSDTEDNEKNSEDDEPHSSPEKLTKKKEVPTPVYSKRVERLKSVIKECGMSVPPVIYKKVKQVPENKREGQLIKELEEILSREGLSSNPSEKEIKEVRRKKARAKELEGIDMSNIVSSSRRRSTTSYAAPPPPKPKIPVKASGDDNEGSGKDNDDEGNDNEVDEEDEEEEDSNDDDDGSESEEFNDDEEDSD* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5071 500 Pfam Histone chaperone domain CHZ 411 442 IPR019098 -
Lja1g5071 500 MobiDBLite consensus disorder prediction 457 500 - -
Lja1g5071 500 MobiDBLite consensus disorder prediction 396 416 - -
Lja1g5071 500 MobiDBLite consensus disorder prediction 1 18 - -
Lja1g5071 500 SMART CHZ_2 409 444 IPR019098 -
Lja1g5071 500 MobiDBLite consensus disorder prediction 282 312 - -
Lja1g5071 500 MobiDBLite consensus disorder prediction 1 26 - -
Lja1g5071 500 MobiDBLite consensus disorder prediction 79 130 - -
Lja1g5071 500 MobiDBLite consensus disorder prediction 319 344 - -
Lja1g5071 500 MobiDBLite consensus disorder prediction 389 500 - -
Lja1g5071 500 PANTHER HIRA-INTERACTING PROTEIN 3 1 499 IPR037647 -
Lja1g5071 500 MobiDBLite consensus disorder prediction 420 434 - -
Lja1g5071 500 MobiDBLite consensus disorder prediction 223 344 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5071 15 445 EF-hand Containing Proteins AT1G44780 46.437 1.32e-92 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5071 - - gmx:100784738 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5071 1 72460967 72471311 Lja1g5071 1 72460967 72471311 ECH