Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5070 ATGCCTTCCGCTCCTTCAAAGCTCTACGCAGATGATGTTAGCCTTCTCGTCGTCACGCTTGACACCAACCCTTTCTTCTGGAGCACTTTCTCCTCCCCGTTCTCCGATTTCCTCTCTCAGGTGCTCGCTTTTCTCAACTCGATCCTCCTCCTCGGTCAGCTTAACCAGGTCGTCGTCATCGCCACCGGGTGCAATTCTTGCGGCTACGTTTACGATTCCGCTTCCGATAAGAACCATGCTTCCACAACCGGCACCATGCCGGCGCTATATTCCAATCTGCTCCGCAACCTTGAACAGTTTGTTGCTAGGGACCAGCAATTAGCCGCGGCGAATCATGCACCGGGAACCGTTCCGTCTTCACTGTTATCAGGGTCATTGTCCATGGCTCTCTGTTATATACAGAGAGCTTTTCGTTCAGGGCCGATGCATCCTCAACCTCGGATTCTATGTTTGCACGGATCTGCTGATGGACCAGAGCAGTATGTGGCAATCATGAATGCAATATTTTCTGCGCAACATTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCAGCGTTCCTTCAGCAGGCTTCATACATTACCGGTGGCATATATTACAGGCCTCCCCAACTGGATGGGCTTTTTCAATATCTTTCAACAGTTTTTGCAACTGATTTGCACTCTCGTGCCTTTTTACGGCTTCCTAAGTCTGTAGGTGTGGACTTTCGTGCCTCGTGCTTCTGCCATAAGCAAACAATTGACATGGGTTATGTATGTTCTGTATGCTTATCCATATTCTGCGAGCATCACGATAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAATCTGATGCTGCCTCAGCAGCCAGTCGTAAAAGAAAGGCTTGA 885 0.4836 MPSAPSKLYADDVSLLVVTLDTNPFFWSTFSSPFSDFLSQVLAFLNSILLLGQLNQVVVIATGCNSCGYVYDSASDKNHASTTGTMPALYSNLLRNLEQFVARDQQLAAANHAPGTVPSSLLSGSLSMALCYIQRAFRSGPMHPQPRILCLHGSADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYRPPQLDGLFQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQSDAASAASRKRKA* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5070 294 Gene3D von Willebrand factor, type A domain 10 222 IPR036465 -
Lja1g5070 294 Pfam Transcription factor Tfb4 13 274 IPR004600 GO:0000439|GO:0006289|GO:0006355
Lja1g5070 294 PANTHER TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED 1 285 IPR004600 GO:0000439|GO:0006289|GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5070 K03143 - gmx:100810574 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5070 1 72438877 72445824 Lja1g5070 1 72438877 72445824 ECH