Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5063 ATGCCCACTTCAGCTTCATTTTTGAGTGAGCTTAGTTCAAAGGAAGCTTGGAAATCCACATCTAACAGGTGGAGTGCAAAGAAGAGCAGATATAGCAGCAGTGGTTGTGAGGCAAGTCTGAGTCAGATGGAAGGGTTTAACATGCAGTATGGGAGTGAGGACTGTACTGGGGTGGTGGTGAGGAAGAGAGTCATGGTTGTTGTTGATGGCTCTTCACATTCCAAGCATGCTATGTTGTGGGCACTCACCCATGTTGTTAACAAGGGTGACTTGTTGACTCTGCTTCACATAGGCTATGAATCTTCTTCTTGCTCCAATTATCTTCTCAATTATTTTGAATCCCTTTGCAAAGATTGCAAGCCTGAGGTGGAAGTGGAACCACTTGTAATCCAAGGACCGAAACTGGCCACAGTGATGAGCCAGGTGAAGAAGCTGGAGGTCTCTGTTCTGGTACTAGGCCAAAAGAAGCCATCTTCTCTGTTAAGCTGTATTTGTGGAACCAGCAACAGCAGCACAGAGGAGTTTGTGGAGCATTGCATCAATAATGCAGAGTGCTTGACAATTGGAGTGAGGAAGAGAGGCCAAGGCACCAATGGCTACTTTATCAGCACTAGGTGGCAGAAGAACTTCTGGCTTTTGGCTTAG 645 0.462 MPTSASFLSELSSKEAWKSTSNRWSAKKSRYSSSGCEASLSQMEGFNMQYGSEDCTGVVVRKRVMVVVDGSSHSKHAMLWALTHVVNKGDLLTLLHIGYESSSCSNYLLNYFESLCKDCKPEVEVEPLVIQGPKLATVMSQVKKLEVSVLVLGQKKPSSLLSCICGTSNSSTEEFVEHCINNAECLTIGVRKRGQGTNGYFISTRWQKNFWLLA* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5063 214 Gene3D HUPs 60 194 IPR014729 -
Lja1g5063 214 Pfam Universal stress protein family 62 99 IPR006016 -
Lja1g5063 214 CDD USP_Like 69 185 - -
Lja1g5063 214 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 214 - -
Lja1g5063 214 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 214 - -
Lja1g5063 214 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5063 Lja-Chr1 72330468 72332214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5063 - - gmx:100816511 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5063 1 72330468 72332214 Lja1g5063 1 72330468 72332214 ECH