Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5062 ATGGAAGAAAGCGTTGTTTTCAACTTGAGCGCTCTCAGATCTCTCTTGTGCATCCTTCAATGGTGGGCTTTCAATGTCACTGTCATCATCGTCAACAAATGGATCTTCCAGAAATTGGATTTCAAGTTTCCCCTATCAGTGTCCTGTGTCCACTTTATCTGCTCATCCATTGGAGCGTATGTGGTAATTAAAGTGCTGAAAATTAAACCACTGATAACTGTTGACCCTGAGGACCGCTGGAAAAGAATCTTCCCAATGTCATTTGTGTTCTGTATTAACATAGTGCTGGGGAATGTGAGCCTTAGATACATTCCAGTGTCTTTTATGCAGACAATAAAGTCATTCACGCCTGCAACTACAGTGTTATTGCAGTGGCTAGTTTGGAGGAAAAGTTTTGACTCTCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTATGACAGAGCTTAGCTTTAATATGTTTGGATTTTGTGCCGCCTTAGTTGGCTGTTTGGCTACATCTACAAAGACTATCCTGGCTGAATCTCTTCTGCACGGCTACAAATTTGACAGCATAAACACAGTCTATTACATGGCACCTTTTGCAACTATGATCTTGGCACTTCCTGCCTTATTACTTGAAGGCAATGGAGTTATTGAATGGCTAAACACTCATCCATATCCTTGGTCGGCCCTCACTATTATTTTTAGCTCTGGGGTGTTGGCTTTCTGCCTTAACTTCTCCATTTTCTATGTGATTCACTCCACCACTGCTGTCACGTTTAATGTTGCCGGAAACCTTAAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTCAGGAACCCAATTTCATATTTAAATGCCGTTGGATGTGGTATAACTCTTGTGGGATGTACATTCTATGGTTATGTCAGGCACATGCTCTCCCAACAACAACCAATTCCAGGAACTCCTAGAACACCCAGAACTCCTCGCACCCCTGGGAGTAAGATGGAGCTGCTTCCTCTTGTAAATGATAAATTAGAAAACAAGGTCTAA 1038 0.422 MEESVVFNLSALRSLLCILQWWAFNVTVIIVNKWIFQKLDFKFPLSVSCVHFICSSIGAYVVIKVLKIKPLITVDPEDRWKRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVLLQWLVWRKSFDSRIWASLIPIVGGILLTSMTELSFNMFGFCAALVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPALLLEGNGVIEWLNTHPYPWSALTIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCGITLVGCTFYGYVRHMLSQQQPIPGTPRTPRTPRTPGSKMELLPLVNDKLENKV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5062 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
Lja1g5062 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 72 153 - -
Lja1g5062 345 PANTHER GDP-MANNOSE TRANSPORTER GONST5 3 328 - -
Lja1g5062 345 Gene3D - 45 156 - -
Lja1g5062 345 PANTHER SOLUTE CARRIER FAMILY 35 3 328 - -
Lja1g5062 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5062 Lja-Chr1 72325404 72329998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5062 1 345 Organic Solute Cotransporters AT1G77610 87.572 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5062 K15285 - gmx:100809511 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5062 1 72325404 72329998 Lja1g5062 1 72325404 72329998 ECH