Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5060 ATGAACGCCTACATTTTCGGCGTCGTGGTTCCCCTCCTCGTCCTCCTCTTCCGAAACTCCAAAAACCCGAAGCGCCGCGGCTTGCCGGCGGATGTCGGTGGCGATCCCGGCCTCACGGTCCGCAACCACCGCTTCACCTCGCCGCTGAGTTCAGCCTGGGAGGGCGTGACGACGCTGGCTGAGCTCTTCGAGCGTGCATGCAAGGAGCATCCGGGGAAGTTGCTGCTCGGGACGCGCGTGTTGATCTCCAGGGAGATTGAAACCTCGAAAGATGGGAGAAGCTTCGAGAAGCTTCATATGGGAGAGTACCAGTGGGTCACGTACTGGAAGGTGTTCGAAACTGTCTCTAATTTCGCCTCTGGTTTGGCCAAGGTTGGCCATGTCAAGGGAGAGCGTGCTGCGATCTTTGCTGAGACCAGAGAAGAATGGTTCATCGCACTCCAGGGTTGCTTCAGGAGAAATGTGACAGTTGTGACTATATATGCGTCGTTGGGAGAGGAAGCTTTGTGTCACTCATTGAACGAGACAGAGGTTACAACTGTGATTTGTGGGCGCAAAGAATTGAGATCACTTGTAAATGTTAGTAGACAACTTGATTCAGTGAGACGTGTGATATGCTTGGACAATGATATCCCATCTGATACCTTGTCAGCTCCGCATAGCTGGTCAATCATTTCCTTTGCTGAAGTTGAGAGGCTTGGTAGAGAAAATCCAATTGAGGCTGATTTACCTCTTTCAGCAGATGTTGCTGTTATAATGTACACAAGTGGAAGTACAGGATTGCCTAAGGGTGTAATGTTGACACATGGCAATGTTTTGGCAACAGTCTCTGCAGTAATGACAATTGTTCCTAAGCTTGGGCCAAAGGATGTCTATCTCGCATACTTACCAATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTGATTGCATCTGTTGGAGGTTCTATAGGATATGGATCTCCTTTGACTCTAACTGATACATCAAACAAGATTAAAAAAGGAACACATGGGGATGCCACTGCATTGAGTCCAACTGTGATGGCAGCTGTACCAGCAATACTTGATCGTGTACGTGATGGAGTGCTCAAGAAGGTAAATGCCAAGGGAGGATTATCAAAGAAGTTGTTTAATTTAGCCTATTCACGAAGGTTGCATGCAATTAATGGTAGCTGGTTTGGCGCTTGGGGCTTGGAACAGGCTCTATGGCATTTTCTTGTGTTCAAAAAAGTCCAAGCAATTCTGGGTGGTCATATTCGTTTTATACTGTCTGGTGGTGCTCCCCTTTCTGCTGATACCCAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGACAAGGATATGGTCTGACAGAAACTTGTGCTGGTGGGACATTCTCTGATTTTGACGATACATCTGTTGGCCGTGTTGGACCACCTCTTCCTTGCTCATATATTAAGCTAATTGACTGGCCTGAAGGTGGATACTCAACTAATGACTCGCCAATGCCTCGTGGTGAAATTGTGGTTGGTGGTCCAAATGTCACTCTTGGGTACTTCAAAAATGAAGAAAAGACAAATGAATCTTACAAGGTTGATGAAAGAGGAGTAAGGTGGTTTTACACTGGTGACATAGGGAGATTTCATCTGGATGGTTGCCTTGAGATCATTGATCGGAAAAAGGACATAGTTAAACTGCAGCAGGGAGAATATGTGTCCTTGGGAAAGGTTGAGGCAGCTCTTCTTGGCAGCCCCTTTGTGGACAACATCATGGTGCATGCTGATCCTTTTCATAGTTACTGTGTGGCACTCGTGGCAGTTCATCATCCCAAATTGGAGGATTGGGCTTCAAAGCAAGGAATTGCTTATTCTGATTTTTCAGAACTGGGCAGCAAAGATGAAACTGTGAAAGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTTTGGAGAAATTTGAGATTCCTGCAAAAATCAAAGTGCTTTCTGACCCATGGACTCCTGAGACTGGCCTTGTTACTGCAGCTCTGAAGCTCAAGAGAGATATCATTAGAAAGACTTTTCAAGAAGACCTTGCAAAGTTATACGCTTGA 2082 0.4606 MNAYIFGVVVPLLVLLFRNSKNPKRRGLPADVGGDPGLTVRNHRFTSPLSSAWEGVTTLAELFERACKEHPGKLLLGTRVLISREIETSKDGRSFEKLHMGEYQWVTYWKVFETVSNFASGLAKVGHVKGERAAIFAETREEWFIALQGCFRRNVTVVTIYASLGEEALCHSLNETEVTTVICGRKELRSLVNVSRQLDSVRRVICLDNDIPSDTLSAPHSWSIISFAEVERLGRENPIEADLPLSADVAVIMYTSGSTGLPKGVMLTHGNVLATVSAVMTIVPKLGPKDVYLAYLPMAHILELVAENLIASVGGSIGYGSPLTLTDTSNKIKKGTHGDATALSPTVMAAVPAILDRVRDGVLKKVNAKGGLSKKLFNLAYSRRLHAINGSWFGAWGLEQALWHFLVFKKVQAILGGHIRFILSGGAPLSADTQRFINICLGAPIGQGYGLTETCAGGTFSDFDDTSVGRVGPPLPCSYIKLIDWPEGGYSTNDSPMPRGEIVVGGPNVTLGYFKNEEKTNESYKVDERGVRWFYTGDIGRFHLDGCLEIIDRKKDIVKLQQGEYVSLGKVEAALLGSPFVDNIMVHADPFHSYCVALVAVHHPKLEDWASKQGIAYSDFSELGSKDETVKEVHASLVKEAKKARLEKFEIPAKIKVLSDPWTPETGLVTAALKLKRDIIRKTFQEDLAKLYA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5060 693 SUPERFAMILY Acetyl-CoA synthetase-like 55 691 - -
Lja1g5060 693 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 692 - -
Lja1g5060 693 Gene3D - 555 688 IPR045851 -
Lja1g5060 693 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Lja1g5060 693 Pfam AMP-binding enzyme 100 561 IPR000873 -
Lja1g5060 693 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 692 - -
Lja1g5060 693 Gene3D - 50 553 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5060 Lja-Chr1 72290246 72303091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5060 20 693 Acyl Lipid Metabolism Gene Families AT2G04350 62.629 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5060 K01897 - gmx:100778889 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5060 1 72290246 72303091 Lja1g5060 1 72290246 72303091 ECH