Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5043 ATGGTAGGCAGCACCATTTGTTGCCTTTGCAAACAATACAAATCAATCATCAAAAGGTGGTTTAGCCGTAAGAAATCATCATCATCAAGCAAAGACAACAACCCACAACGCCAGAACCAAACTGAACAGGAACATGATGCAAAGAACGGAGCGGGCGCAACCATGAATGGAATTCACAGTTTCAGATTGAAAGAAGATGCTTTGAGAGACAAAGATTTTATGATGAGTTTAAAAGGATGTTGTTTATGTAGGCATAGAAGCTTAGATGATTCTAGTTTTCCTTCCACGGCTTCTCTGGCCAGAAAAAAGAGCAGAAAGGTCACCCGCGCACGAAGTAAGAGCAGGGAGAGCTATGATTTCACGCCTACCACCTCTTCATTGAATAACAGTGGCAATCTCAGATTGCCTCCTCATGTGCAGTCAAGAAGTGTCAGCCGTAGGAGCAGCACCCCAATCATGTATTCTAATTCGTCTGGGAGGCTGAAACCCCCACCAATTGAGAAAAAGCTTGAATGCACCCTTGAAGAGTTGTGCTATGGATGCAAGAAAAATATCAAGATCACAAGAGATGTCATCACAGATACAGGGGAAATAGTTCAAGAGGAGGAGCTGCTAACAATAAATGTGCAGCCTGGATGGAAGAAAGGGACAAAGATTAAATTTGAAGGAAAAGGTAATGACAGGCCTAATGCTTACAGAGAAGACATAGTATTTTTCATCTCTGAGAAAAGACACCAACTATTTAGAAGAGAAGAGGATGACTTGGAATTGGGGGTAGAAATTCCCTTATTGAAGGCACTTACTGGCTGCACAATATCAGTGCCACTGTTGGGTGGAGAGCAAATGAAATTGAGAGTGGATGATGTCATATACCCTGGCTTTGAGAAGATAATCACTGGCCAAGGCATGCCAATCACCAAAGAACCAGAGAATAGGGGAAACTTAAGAATTACATTTCTAGTTGAGTTTCCAAAAAAACTCACAGAGAATCAAAGATCTGAGGTTTTTGATATTTTGCAGGATTCTAGTTGA 1032 0.4157 MVGSTICCLCKQYKSIIKRWFSRKKSSSSSKDNNPQRQNQTEQEHDAKNGAGATMNGIHSFRLKEDALRDKDFMMSLKGCCLCRHRSLDDSSFPSTASLARKKSRKVTRARSKSRESYDFTPTTSSLNNSGNLRLPPHVQSRSVSRRSSTPIMYSNSSGRLKPPPIEKKLECTLEELCYGCKKNIKITRDVITDTGEIVQEEELLTINVQPGWKKGTKIKFEGKGNDRPNAYREDIVFFISEKRHQLFRREEDDLELGVEIPLLKALTGCTISVPLLGGEQMKLRVDDVIYPGFEKIITGQGMPITKEPENRGNLRITFLVEFPKKLTENQRSEVFDILQDSS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5043 343 CDD DnaJ_C 164 327 - -
Lja1g5043 343 Gene3D - 165 244 - -
Lja1g5043 343 MobiDBLite consensus disorder prediction 117 157 - -
Lja1g5043 343 MobiDBLite consensus disorder prediction 24 57 - -
Lja1g5043 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 160 255 IPR008971 GO:0006457|GO:0051082
Lja1g5043 343 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 340 - -
Lja1g5043 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 248 333 IPR008971 GO:0006457|GO:0051082
Lja1g5043 343 Pfam DnaJ C terminal domain 166 324 IPR002939 -
Lja1g5043 343 Gene3D - 245 325 - -
Lja1g5043 343 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 1 340 - -
Lja1g5043 343 MobiDBLite consensus disorder prediction 90 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5043 Lja-Chr1 71055384 71057456 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5043 K09519 - gmx:100782604 393.66