Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5035 ATGGCTTCAACAATCTCCAACGCCCCCTGCACGCTCAACACCCAAACCTACGTTGCTCTCAGACCACCGCACGGGACTCCAAACTTCGCTTCTCCCCGCCCTCCGCGCCTCTTCGCCGTCAGGGCCAGTGACTCCGATTGTGAAGCCGCCGTAGTCGCCGGAAGAGTGCCGGATGCCCCTCCTGTTCCGCCCAAGCCCGCCGCCCCAGCTGGAACCCCTGTGGTCCCTCCACTTCCACTTCACCGGCGTCCTCGTCGGAATCGAAGGACACCGGCACTTCGATCAGCTTTTCAGGAAACAACCATTTCACCTGGGCATTTTGTGTATCCCTTATTCATACATGAAGGTGAGGAAGACACACCAATTGGGGCTATGCCTGGATGCTACAGGCTTGGTTGGAGACATGGACTTGTGCAAGAGGTTGCAAAGGCACGAGATGTTGGTGTTAATAGTGTTGTCCTCTTCCCCAAAATTCCAGATGCTTTGAAGACTCCTACCGGAGATGAAGCATACAGTGAGAATGGCTTAGTGCCTCGAGCAATACGTTTGCTCAAGGATAAGTACCCTGACCTTGTTATCTATACAGACGTTGCATTAGATCCTTATTCATCAGATGGCCATGATGGCATAGTTAGAGAAGATGGAGTTATTATGAATGACGAGACAGTTCATCAGCTTTGTAAACAAGCTGTAGCCCAGGCCCGAGCTGGAGCAGATGTTGTCAGTCCTAGTGATATGATGGATGGTCGGGTAGGAGCAATAAGAGCGGCTCTTGATGCTGAAGGCTTTCAGCATGTTTCTATAATGTCATATACAGCAAAGTATGCAAGTTCATTTTATGGCCCATTTAGAGAAGCACTGGACTCAAACCCCCGGTTTGGAGACAAAAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGACAGAGATGCGAGAAGATGAATCTGAAGGAGCTGATATTCTCTTGGTGAAGCCAGCTCTTCCTTATTTGGATGTCATAAGGCTGCTCAGGGATAATTCTCCTTTGCCAATTGCAGCATACCAGGTTTCTGGTGAATACTCGATGATCAAAGCTGGTGGTGCTCTTAAAATGATTGATGAAGAAAAGGTTATGATGGAGTCACTATTATGCCTCCGTCGGGCTGGTGCTGATGTCATCCTTACTTATTTTGCTCTTCAAGCGGCCAGATCTTTGTGTGGAGAGAAGAGGTGA 1221 0.4906 MASTISNAPCTLNTQTYVALRPPHGTPNFASPRPPRLFAVRASDSDCEAAVVAGRVPDAPPVPPKPAAPAGTPVVPPLPLHRRPRRNRRTPALRSAFQETTISPGHFVYPLFIHEGEEDTPIGAMPGCYRLGWRHGLVQEVAKARDVGVNSVVLFPKIPDALKTPTGDEAYSENGLVPRAIRLLKDKYPDLVIYTDVALDPYSSDGHDGIVREDGVIMNDETVHQLCKQAVAQARAGADVVSPSDMMDGRVGAIRAALDAEGFQHVSIMSYTAKYASSFYGPFREALDSNPRFGDKKTYQMNPANYREALTEMREDESEGADILLVKPALPYLDVIRLLRDNSPLPIAAYQVSGEYSMIKAGGALKMIDEEKVMMESLLCLRRAGADVILTYFALQAARSLCGEKR* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5035 406 Pfam Delta-aminolevulinic acid dehydratase 82 399 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 2, CHLOROPLASTIC-RELATED 58 405 - -
Lja1g5035 406 PRINTS Delta-aminolevulinic acid dehydratase signature 199 213 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 PRINTS Delta-aminolevulinic acid dehydratase signature 375 394 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 PRINTS Delta-aminolevulinic acid dehydratase signature 320 336 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 PRINTS Delta-aminolevulinic acid dehydratase signature 345 360 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 PRINTS Delta-aminolevulinic acid dehydratase signature 268 287 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 PRINTS Delta-aminolevulinic acid dehydratase signature 230 249 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 MobiDBLite consensus disorder prediction 58 80 - -
Lja1g5035 406 SMART ALAD_2 79 401 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 Gene3D Aldolase class I 74 406 IPR013785 -
Lja1g5035 406 SUPERFAMILY Aldolase 76 401 - -
Lja1g5035 406 CDD ALAD_PBGS_aspartate_rich 90 402 - -
Lja1g5035 406 MobiDBLite consensus disorder prediction 58 89 - -
Lja1g5035 406 PANTHER DELTA-AMINOLEVULINIC ACID DEHYDRATASE 58 405 IPR001731 GO:0004655|GO:0033014|GO:0046872
Lja1g5035 406 ProSitePatterns Delta-aminolevulinic acid dehydratase active site. 320 332 IPR030656 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5035 K01698 - gmx:548095 651.744