Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5030 ATGGCTTCAGGTTCAGATTTCGCTTTAGCATCCTCTTCTGAACTCGAGTCAATTTTGAGGTTGAAGACTGTTGATTACTTTGTGACCAGGAGGCCATGGCTTGATCTTTATGGAATTAATGTGAGACCTGTTGCACCATTTGGAAGTATAAGTAGAAAGCCTTATGTGGATTCTGCACTTATACATCGTTGCTTACCGGATGAGCTGCTCTTTGAGGTCTTTGCTCGAATGACTCCATATGACATGGGGAAAGCATCTTGTGTATGTCGAAAATGGAAGTATACAATTCGTAACCCTGTATTTTGGCGCCATGCCTGCTTGAAGGCTTGGCAGTTTTCTGGAGTGGTAGAAAACTATAAGATACTTCAGTCTAAATATGATGGCTCATGGCGGAAAATGTGGCTCTTACGACCAAGGTTGAGAACTGATGGTCTTTATGTGAGTAGAAATACCTACATTCGAGCCGGAGTTGCGGAGTGGAAAATCACTAATCCAGTTCATGTGGTTTGCTATTTTCGGTACATTAGATTTTTTCCTTCTGGGCGATTTCTTTACAAGAATTCTTCTCAAAAGGTCAAGGATGTAGTGAAGTGCATGAACTTCCGATCATCTAAAGCAGAATGTGTTTTCGGTGGGAACTACACATTGTCAGATGATAAGGTTGAAGCTGCTGTCTTGTATCCAGGCTTGCGACCTACTGTTTTGAGGATACGCTTGAGGTTGAGGGGAACAGCTACAGGGGCTAACAATCGGATGGATTTGATCTCACTTGTCACTAGTGGTGTGAACAGTAATGAGGCAAGTGCTCCTGAGGAGGACATTCTTGGAGTTGTTGATGGATGGCAGGATGATGAAACACACAACCCAGATGTGCCAGCAGTCTCACATAAAAGGGGCATGACTCCCTTTGTCTTTGTTCCATTTGAAGAGGTGGAGACATCTGTTTTGAATCTGCCTGTGGAGAAGATGGATTATTATGTACCTGGTTGA 990 0.4323 MASGSDFALASSSELESILRLKTVDYFVTRRPWLDLYGINVRPVAPFGSISRKPYVDSALIHRCLPDELLFEVFARMTPYDMGKASCVCRKWKYTIRNPVFWRHACLKAWQFSGVVENYKILQSKYDGSWRKMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYIRFFPSGRFLYKNSSQKVKDVVKCMNFRSSKAECVFGGNYTLSDDKVEAAVLYPGLRPTVLRIRLRLRGTATGANNRMDLISLVTSGVNSNEASAPEEDILGVVDGWQDDETHNPDVPAVSHKRGMTPFVFVPFEEVETSVLNLPVEKMDYYVPG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5030 329 Pfam F-box only protein C-terminal region 119 329 IPR045464 -
Lja1g5030 329 Pfam F-box-like 63 108 IPR001810 GO:0005515
Lja1g5030 329 ProSiteProfiles F-box domain profile. 59 105 IPR001810 GO:0005515
Lja1g5030 329 SMART fbox_2 65 105 IPR001810 GO:0005515
Lja1g5030 329 PANTHER F-BOX ONLY PROTEIN 9 12 313 - -
Lja1g5030 329 PANTHER F-BOX ONLY PROTEIN 48-RELATED 12 313 IPR045118 GO:0019005|GO:0031146
Lja1g5030 329 SUPERFAMILY F-box domain 63 141 IPR036047 GO:0005515
Lja1g5030 329 Gene3D - 51 143 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5030 K10295 - gmx:100786704 632.484