Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5027 ATGGTGGTGCTGCATCAGAAGGTGGTGGTGGAACGGTGGTGGCGGTGTTCATTCCTTGCACTCATTTTAACTGCATCTCTCGGCGCAGTCCACGGTGGCGATGTCACCTACGACGGAAGGTCCTTAATCATTGATGGACAACATAAAATCCTCTTCTCTGGTTCAATTCACTATCCTCGTAGCACTCCTGAGATGTGGCCTAATTTAATTGTGAAAGCTAAGGAAGGGAGAATAGATGTCATACAAACTTATGTGTTTTGGAACCTACACGAGCCTCATCAAGGCCAGTATGATTTTAGTGGAAGACGTGACTTAGTGAGATTCATTAAGGAAATTCAAGCGCAAGGTTTATATGTGACCCTTCGAATTGGACCATACATTGAGAGTGAATGGACTTACGGGGGCCTACCATTATGGCTACATGATATTCCTGGTATTGTTTTCAGATCTGATAATCAGCCATTCAAGATTCAGATGCAAAGATTCACTGCGAAAATAGTGAACATGATGAAATCGGCTAATCTTTATGCTTCACAAGGAGGGCCTATCATACTATCACAGATTGAGAATGAATATGGGACTGTTGAAAGTTCGTTTCACGAGAAAGGATTGCCCTATGTTCGTTGGGCTGCCCAAATGGCCGTGGGACTCCAAACTGGTGTACCTTGGGTCATGTGCAAACAAGATGATGCTCCTAATCCAGTGATCAACACGTGCAATAGTATGCAGTGCGGGACAAAATTCAAGGGTCCAAACTCGCCCAACAAGCCTTCATTGTGGACAGAGAATTGGACAAGTTTTGTTGAAGTCTTTGGAGGAAAACCATACTTGAGATCAGCTCAAGACATTGCCTATAATGTTGCCTTGTTCATTGCAAAGAACGGAAGCTATGTCAATTACTACATGTACCATGGAGGAACCAATTTTGACAGATCGGCTTCAGCTTACGTAATAACAGCTTATTACGACCAAGCTCCACTAGATGAATATGGTTTGATTAGGCAACCAAAATGGGGCCATCTTAAGGAACTACATGCTGCAATCAAGTCATGTTCAAAACCTCTCCTCTATGGAACTCAAACAACAATCAGCTTGGGCCCTCAGCAACAAGCTTATGTTTTCAAAAGTAGCTCAACAGATTGTGCTGCCTTCCTAGAAAATAGTGGAGACATGGATGTGAAAATTCAATTTCAAAATATTTGGTATCAACTACCACCAAAATCAATCAGTATTCTACCAGGCTGCAAGAATGTAGCCTTCAACACAGCTAAGGTGACAGTGCCAAGCAATACCAGAGAAATGAAATCACAGATACAGTTTAACTCAGCTGAAAAATGGAAAGTGTACAGAGAAGCCATCCCTAACTTGGATGATACTTCATTAAGAGCAAATATACTTTTAGATCAAATCAGCACAGCAAAAGATACATCTGACTACATGTGGTACACTTTCAGGTTTTATCACAACTCTCCTAATGCTCAATCTGCTCTTAGTGTGCTCAGCCAAGGACATGTTTTGCATGCCTTCATCAATGGAGTTTTAGCAGGTTCTGCACATGGAAGCCCTGGTGATAAATCTTTCATTATGGAGAACAATGTCAAACTGACACCTGGGAGGAACTACATTTCCTTCCTGAGTGCAACAGTTGGACTGCCGAACTCAGGAGCATATCTAGAGCGCAGAGTTGCTGGTCTACGTAGTGTGAAAGTTCAAGGCAGAGATGTCACTAACCAATCATGGGGATATCAGGTTGGATTGTTAGGAGAAAAATTGCAAATCTATACAGCTAGTGGATCAAGTAAAGTTCAGTGGGAAAGTTTTCAAAGCTCTACTAAACCACTTACATGGTATCAGACCACATTTGATGCACCAGAGGGCAACAATCCTGTAGTGCTTAATCTTGGCTCTATGGGAAAAGGAATTACTTGGGTTAATGGCCAAGGTATTGGCCGATATTGGGTATCTTTCCACACACCAGATGGAACTTCTTCACAGAACTGGTATCACATACCCCGTTCCATCCTAAAATCTACTGGGAACCTACTAGTTATACTAGAAGAAGAGAGTGGGAACCCACTAGAGATCACTCTAGACACAGTATACACCACCTGA 2112 0.4238 MVVLHQKVVVERWWRCSFLALILTASLGAVHGGDVTYDGRSLIIDGQHKILFSGSIHYPRSTPEMWPNLIVKAKEGRIDVIQTYVFWNLHEPHQGQYDFSGRRDLVRFIKEIQAQGLYVTLRIGPYIESEWTYGGLPLWLHDIPGIVFRSDNQPFKIQMQRFTAKIVNMMKSANLYASQGGPIILSQIENEYGTVESSFHEKGLPYVRWAAQMAVGLQTGVPWVMCKQDDAPNPVINTCNSMQCGTKFKGPNSPNKPSLWTENWTSFVEVFGGKPYLRSAQDIAYNVALFIAKNGSYVNYYMYHGGTNFDRSASAYVITAYYDQAPLDEYGLIRQPKWGHLKELHAAIKSCSKPLLYGTQTTISLGPQQQAYVFKSSSTDCAAFLENSGDMDVKIQFQNIWYQLPPKSISILPGCKNVAFNTAKVTVPSNTREMKSQIQFNSAEKWKVYREAIPNLDDTSLRANILLDQISTAKDTSDYMWYTFRFYHNSPNAQSALSVLSQGHVLHAFINGVLAGSAHGSPGDKSFIMENNVKLTPGRNYISFLSATVGLPNSGAYLERRVAGLRSVKVQGRDVTNQSWGYQVGLLGEKLQIYTASGSSKVQWESFQSSTKPLTWYQTTFDAPEGNNPVVLNLGSMGKGITWVNGQGIGRYWVSFHTPDGTSSQNWYHIPRSILKSTGNLLVILEEESGNPLEITLDTVYTT* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5027 703 Pfam Beta-sandwich domain in beta galactosidase 355 425 IPR041392 -
Lja1g5027 703 PANTHER BETA-GALACTOSIDASE 15 700 - -
Lja1g5027 703 SUPERFAMILY Galactose-binding domain-like 579 701 IPR008979 -
Lja1g5027 703 PANTHER BETA-GALACTOSIDASE RELATED 15 700 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 Gene3D Glycosidases 33 352 - -
Lja1g5027 703 Pfam Glycosyl hydrolases family 35 41 347 IPR031330 -
Lja1g5027 703 SUPERFAMILY Galactose-binding domain-like 409 568 IPR008979 -
Lja1g5027 703 SUPERFAMILY (Trans)glycosidases 33 351 IPR017853 -
Lja1g5027 703 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 180 192 IPR019801 GO:0004553|GO:0005975
Lja1g5027 703 Gene3D - 573 702 - -
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 296 311 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 612 626 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 66 84 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 178 193 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 45 62 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 121 140 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 639 655 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 259 274 IPR001944 GO:0004553|GO:0005975
Lja1g5027 703 PRINTS Glycosyl hydrolase family 35 signature 315 331 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5027 Lja-Chr1 70652455 70662174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5027 19 700 Glycoside Hydrolase AT5G63800 61.014 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5027 - - pvu:PHAVU_009G127500g 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5027 1 70652455 70662174 Lja1g5027 1 70652455 70662174 ECH