Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5026 ATGAATTCATTGAATTTGCGATTGCGAGCCATCCAAGTGCCGCCGCCGGTGATGAAGAGAAAAAGACAATCCCCAAAACCGCCTCCCTCCACCCCTCCAACGCCACAAACCCAAGCCCGCCACTCCAAAACCGCCGCAAAATCCCGCGACTGGGTCCCTCTGAACCTGACCCGCGAAGAGCTCTCACTGCCGCTCACCTTCCCCACCGGCCAAACCTTCCGCTGGAAAAACACCGCCCCTCTGCAGTACACCGGCGTCGTCGGCTCCCACCACCTCCTATCCCTCAAGCATCTCCAAAACGGCGACGTCTGCTACTGCCTTCACTCCCGCTCCGATGACGGTTCCCACTCCGATGCCAGAACGGCCTTGCTCGACTTCCTCAACGCCGGCGTTTCGCTCGCTGATATGTGGAAGGTGTTCTCGGATTCCGATGCCCGGTTCGCCGAGTTGGCTCGCCATTTGGGTGGTGCTCGGGTGCTCAGGCAAGACCCTTTTGAGTGCTTGATTCAGTTCCTGTGTTCTTCCAACAACAACATTGGGAGGATTACAAAGATGGTTGATTACGTTTCCTCTCTTGGGAGTTACTTGGGTCCAGTTGGTGATTTTCACTTCCATGCTTTTCCTACTTTGGAGCAGCTTTCATTGGTCTCAGAGCAACAGCTTAGAGATGCTGGTTTTGGTTACAGGGCTAAGTATATAATTGGCACGGTGAATGCTTTGCAATCGAAACCTGAGGGAGGGGAAGAGTGGCTTCGTTCTCTTCGTAAATTGGATCTTCAAGATGTTATATCTGCCCTTTCTACGCTACCTGGAGTGGGTCCTAAAGTTGCTGCTTGCATAGCTCTGTTCTCACTTGATCAACACCATGCCGTTCCTGTTGACACCCATGTGTGGAAGATTGCCAAAAGGTATATCTTACCTGAGCTTGCAGGTTCCTCGTTGACACCAAAGCTCTGTAATCGTGTTGCAGAGGCATTTGTTACTAAGTATGGTAAATATGCTGGTTGGGCTCAAACTCTTCTATTCATAGCTGAATTGCCATCACAAAAGACCCTCCTGCCTTCACATTTGTGGACTACCGAACAGAAAAGTCCCGCAAAGATAGAAGACAGTGGAGAAGAAGTTGGTAAGAAAAGCAACTGTAGTCGTTCAATCTTCCCCTTATTATAA 1170 0.506 MNSLNLRLRAIQVPPPVMKRKRQSPKPPPSTPPTPQTQARHSKTAAKSRDWVPLNLTREELSLPLTFPTGQTFRWKNTAPLQYTGVVGSHHLLSLKHLQNGDVCYCLHSRSDDGSHSDARTALLDFLNAGVSLADMWKVFSDSDARFAELARHLGGARVLRQDPFECLIQFLCSSNNNIGRITKMVDYVSSLGSYLGPVGDFHFHAFPTLEQLSLVSEQQLRDAGFGYRAKYIIGTVNALQSKPEGGEEWLRSLRKLDLQDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWKIAKRYILPELAGSSLTPKLCNRVAEAFVTKYGKYAGWAQTLLFIAELPSQKTLLPSHLWTTEQKSPAKIEDSGEEVGKKSNCSRSIFPLL* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5026 389 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 54 168 IPR012904 GO:0003684|GO:0006289|GO:0008534
Lja1g5026 389 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 50 362 - -
Lja1g5026 389 MobiDBLite consensus disorder prediction 13 50 - -
Lja1g5026 389 CDD ENDO3c 165 343 IPR003265 GO:0006284
Lja1g5026 389 Gene3D - 37 127 - -
Lja1g5026 389 Gene3D Hypothetical protein; domain 2 163 283 - -
Lja1g5026 389 MobiDBLite consensus disorder prediction 20 35 - -
Lja1g5026 389 Gene3D - 284 347 IPR023170 -
Lja1g5026 389 PANTHER N-GLYCOSYLASE/DNA LYASE 50 362 - -
Lja1g5026 389 SUPERFAMILY TATA-box binding protein-like 48 162 - -
Lja1g5026 389 SMART endo3end 173 346 IPR003265 GO:0006284
Lja1g5026 389 Pfam HhH-GPD superfamily base excision DNA repair protein 169 304 IPR003265 GO:0006284
Lja1g5026 389 SUPERFAMILY DNA-glycosylase 163 344 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5026 K03660 - gmx:100789749 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5026 1 70645253 70648100 Lja1g5026 1 70645253 70648100 ECH