Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5011 ATGAAGATGAATGAGAAGAATGGCAGCAAGAACAACCATCATCACCAGGCTTTTGATGTCTCCCTTGACATGCAACAACAAGGAGGCTCTAAGTGCTTCGACGACGATGGTCGCCTCAAAAGAACTGGGACTGTGTGGACTGCAAGTGCACATATCATAACTGCTGTGATTGGCTCTGGGGTTCTCTCCCTGGCTTGGGCTATAGCTCAGCTTGGATGGGTTGCTGGTCCTGCTGTCATGATTCTCTTCTCTCTGGTGACTTACTACACCTCCATTCTTCTCTGTGCTTGTTATAGAAATGGTGATCCTGTCAATGGCAAGAGAAACTACACTTACATGGATGTTGTTCATTCAAACATGGGTGGCATTCAGGTCAAGTTATGTGGGATAGTTCAGTACCTTAACCTTTTTGGTGTCGCCATTGGATACACTATAGCGTCATCCATTAGCATGATAGCAATTGAAAGGTCTAATTGTTTCCACAAGAGTGAGGGAAAAGATCCATGCCACATGAATGGCAATATCTACATGATTTCATTTGGTTTGGTGGAAATTGTTCTCTCTCAAATTCCAGACTTTGATCAATTATGGTGGCTCTCCATTTTAGCTGCTGTCATGTCCTTCACATACTCCACAATTGGGCTAGGCCTTGGTTTTGGAAAAGTTATAGAAAACGGAGCAGTTGGGGGAAGCCTAACTGGCATAACAGTTGGAACAGTAACACAAACTCAAAAAGTTTGGAGGACCTTGCAAGCTCTTGGTGACATAGCCTTTGCCTATTCATACTCCATGATCCTTATAGAAATTCAGGACACTGTAAAATCACCTCCATCAGAGTCAAAAACAATGAAGAAGGCATCTTTCATCAGTGTGGTAGTGACCACCCTTTTCTACATGCTTTGTGGTTGCTTTGGCTATGCTGCATTTGGAGATTCAAGCCCTGGAAACCTTCTCACTGGTTTTGGCTTCTACAACCCATTTTGGCTCATTGACATTGCCAATGCTGCCATAGTTATCCACCTTGTTGGTGCATACCAAGTCTACTCCCAGCCCCTCTTCGCCTTCGTTGAAAATTACGCGGCGGAAAAATTCCCAGACAGCGATTTTGTGACAAAAACCGTTCAAATCCCATTGTTCAATGCTTACAAAATCAATCTCTTCAGGCTGGTTTGGAGGACAATTTTTGTGATCATCACAACTTTGATTTCAATGCTTCTCCCATTCTTCAATGACATAGTGGGGCTTCTTGGAGCACTTGGATTTTGGCCTCTCACTGTGTATTTCCCGGTGGAGATGTACATTATTCAGAAGAGAATACCAAAGTGGAGTATCAAGTGGATCTGCTTTCAATTGTTTAGTCTTGCTTGCCTTATAGTTACTGTAGCAGCTGCAGCTGGCTCTGTTGCTGGGATTTTCCTTGATCTTCAAGTTTATAAGCCATTCAAGGCCATCTATTGA 1458 0.4328 MKMNEKNGSKNNHHHQAFDVSLDMQQQGGSKCFDDDGRLKRTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVMILFSLVTYYTSILLCACYRNGDPVNGKRNYTYMDVVHSNMGGIQVKLCGIVQYLNLFGVAIGYTIASSISMIAIERSNCFHKSEGKDPCHMNGNIYMISFGLVEIVLSQIPDFDQLWWLSILAAVMSFTYSTIGLGLGFGKVIENGAVGGSLTGITVGTVTQTQKVWRTLQALGDIAFAYSYSMILIEIQDTVKSPPSESKTMKKASFISVVVTTLFYMLCGCFGYAAFGDSSPGNLLTGFGFYNPFWLIDIANAAIVIHLVGAYQVYSQPLFAFVENYAAEKFPDSDFVTKTVQIPLFNAYKINLFRLVWRTIFVIITTLISMLLPFFNDIVGLLGALGFWPLTVYFPVEMYIIQKRIPKWSIKWICFQLFSLACLIVTVAAAAGSVAGIFLDLQVYKPFKAIY* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5011 485 PANTHER AMINO ACID CARRIER 12 479 - -
Lja1g5011 485 PANTHER OS05G0424000 PROTEIN-RELATED 12 479 - -
Lja1g5011 485 Pfam Transmembrane amino acid transporter protein 41 472 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5011 Lja-Chr1 70332690 70338573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g5011 13 485 Organic Solute Cotransporters AT1G77380 75.368 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5011 K24917 - tcc:18592400 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5011 1 70332690 70338573 Lja1g5011 1 70332690 70338573 ECH