Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g5005 ATGGACGAGTTTGGTGTGTTGACCGAAAGGTATGGATTGAAACCGCAAGGAAAATCGGCACCAATGGCCTCATCAAAGCGATCCAACCATGATTCGGGTTCCAATCTTAAACCTTCCCAAAACGGATCCAGATCTCCCCAGCATTCCAATTTCGATTTTGATTTCGGCGCTTTCGCCGGCGCCGAGAAGAAAAACCAGAACAATTTTGGGGGTTTTGGTGATGGCATTGATGAGATCTTCGGTGGAAAAACTGTGAAATCGAATGTCGGTGGCGGTGGTGGTGGTGGTTCGTTTGATTATGATTCGATTTTCGGCGGTTCAAACAAACCGGCTTCTACGTCTTCGTCAGTTTATGTGGATGATATATTCGGTGGAATGAATAATAAGCAGAGTGTTGGTGTTGATGATCTGCTTGATAAGATTGGTGGGCTGCATGCAAATACCAAAAGTTCCAATGAGAAAGGGATTGATTCTGATGAATTGATTCCTGGGTTTGGTGGAAGCAATGTTTCAAATAATGGTAAAACAGGTTTTCAGATGAATAAGCCTCATAAACCAGCTGCCACATTGAAAAGTCCTCCTGCCCCAGCTAACAGCGATCCATTTTTGGTATTTGAAACCTCTGCAAGCACAGGAGCTTCAGATTCATTCCTGGACTCGTTGGAACATATAAGTAAGTTGAATAATTCCAAAGGTACCAGCTCCAATTCCTCCCCATCGTTGAGGTCTCCGCCCAAGCCAAAGAATGTTTCAAACTCAATTAACAATGCTAGTAGATCATCAATAGATGAGCTTGAGGACTTTGCCATGGGGCAAGTGCATAATAATGCTAGTAAAAAGGCCAATGTAAATACTGGTGAGATTAAACAAAACTTAGCAGCTAAGACAAACAGAGATAAAGGAGCTCCAGCTGCTAGAACGAATAAATTAAATGATGTTGATGATCTTGAATCCTTTTTCAGCATGGGTTCTCGGTCAAGCAGTGTACCAAAGTCAAGGGCTGCAACTATGGATCATATGTCTGATCGCCAAACAAATAACAAAGGGAAACCTGAGGCATCACCAAGAGCGTCTTCAGCATCCCCTGCCAACATGAAGAAATCTTCAGTGACGACATCTTTTGATGACCTGTCATTGATTTTTGGTGGTTCCCCATCATCTGAGTTCATGGAAGTTGAAGGTGAAACTGAAGAAAGACGAAAAGCGAGATTGGGACGTCATCAGAGAGCGCAAGAAAGAGCGTTGAAAGCAGTGGCTGATATGAACCAACGTGACCTTCAATCTAAGATGGAGCAAGAAGAAAAGCGTAGAATTGCAGATACTATAGATGTTCAGATAAAGCGGTGGGCTGCAGGGAAAGAAGGCAATATGCGGGCTTTGCTATCAACATTACAACATGTTCTTTGGCCAGAATGTGGTTGGCAACCAGTGTCTCTGACTGATATGATCACTTCCGCCTCAGTTAAGAAAGTTTATAGAAAAGCAAATTTATATATTCACCCAGATAAAGTCCAACAAAAAGGTGCTACTCTTGAACAGAAATATACTGCAGAGAAGGTTTTTGACATCCTTAAGGAAGCTTGGAACAAGTTCAATGCGGAAGAGCTTTCTTAG 1614 0.4257 MDEFGVLTERYGLKPQGKSAPMASSKRSNHDSGSNLKPSQNGSRSPQHSNFDFDFGAFAGAEKKNQNNFGGFGDGIDEIFGGKTVKSNVGGGGGGGSFDYDSIFGGSNKPASTSSSVYVDDIFGGMNNKQSVGVDDLLDKIGGLHANTKSSNEKGIDSDELIPGFGGSNVSNNGKTGFQMNKPHKPAATLKSPPAPANSDPFLVFETSASTGASDSFLDSLEHISKLNNSKGTSSNSSPSLRSPPKPKNVSNSINNASRSSIDELEDFAMGQVHNNASKKANVNTGEIKQNLAAKTNRDKGAPAARTNKLNDVDDLESFFSMGSRSSSVPKSRAATMDHMSDRQTNNKGKPEASPRASSASPANMKKSSVTTSFDDLSLIFGGSPSSEFMEVEGETEERRKARLGRHQRAQERALKAVADMNQRDLQSKMEQEEKRRIADTIDVQIKRWAAGKEGNMRALLSTLQHVLWPECGWQPVSLTDMITSASVKKVYRKANLYIHPDKVQQKGATLEQKYTAEKVFDILKEAWNKFNAEELS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g5005 537 MobiDBLite consensus disorder prediction 392 407 - -
Lja1g5005 537 MobiDBLite consensus disorder prediction 275 292 - -
Lja1g5005 537 MobiDBLite consensus disorder prediction 21 50 - -
Lja1g5005 537 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 239 - -
Lja1g5005 537 MobiDBLite consensus disorder prediction 320 369 - -
Lja1g5005 537 Gene3D DnaJ domain 408 536 IPR036869 -
Lja1g5005 537 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 311 536 - -
Lja1g5005 537 MobiDBLite consensus disorder prediction 227 369 - -
Lja1g5005 537 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 239 - -
Lja1g5005 537 MobiDBLite consensus disorder prediction 1 56 - -
Lja1g5005 537 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 311 536 - -
Lja1g5005 537 MobiDBLite consensus disorder prediction 171 203 - -
Lja1g5005 537 SUPERFAMILY Chaperone J-domain 385 535 IPR036869 -
Lja1g5005 537 MobiDBLite consensus disorder prediction 388 407 - -
Lja1g5005 537 MobiDBLite consensus disorder prediction 227 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g5005 Lja-Chr1 70241124 70247226 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g5005 - - lja:Lj1g3v0874340.1 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g5005 1 70241124 70247226 Lja1g5005 1 70241124 70247226 ECH