Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4986 ATGGCCACGAGTTGCTCCTACATGGTTTCCACCAAATTATCTATGTTAGGCTGGACTGGAGGAGGAAGAACAGGGCTCAAAAACAAGAGAGCATTTTTCATTTCAGCTCAGCAACAAACAACTGATGTTCAAGAAGGAGAAGAGACAGTGAAGGAACAAGAAGAGCAAGAGCAAGTAGGTAGCCAGAAAATGAACCCAAAAGGAGTGAAACCTAGACCAGCAGAGACTCAGATCAATGTGAAGAGCAAAAACATGAGCAGGGAGTATGGAGGACAGTGGCTGAGTACTGCCACGCGCCACGTGAGGATCTACGCGGCGTACATCGACCCGGAGACTTGGGAGTTTGATCAAACCCAGATGGATAAGCTTACCCTTCTTCTTGATCCCCAGGATGAGTTTGTGTGGAATCCTGAGACATGCAACATGGTTTTTTCGTACTTTCAAGAGCTCGTCGATCACTACGAGGGTTCTCAATTGACAGAATACACGCTTCGCCTGATTGGTTCAGACATAGAGCACTACATAAGAAAGCTGTTATATGATGGAAAACTCAAGTATAATATGAATGCAAGGGTTTTGAATTTCAGCATGGGCAAGCCAAGAGTCATGCTCAACAATGATATTAAACCTGAAGACACCCCTGAGAAATAA 651 0.447 MATSCSYMVSTKLSMLGWTGGGRTGLKNKRAFFISAQQQTTDVQEGEETVKEQEEQEQVGSQKMNPKGVKPRPAETQINVKSKNMSREYGGQWLSTATRHVRIYAAYIDPETWEFDQTQMDKLTLLLDPQDEFVWNPETCNMVFSYFQELVDHYEGSQLTEYTLRLIGSDIEHYIRKLLYDGKLKYNMNARVLNFSMGKPRVMLNNDIKPEDTPEK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4986 216 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 209 IPR018922 GO:0016655
Lja1g4986 216 Coils Coil 36 56 - -
Lja1g4986 216 MobiDBLite consensus disorder prediction 39 74 - -
Lja1g4986 216 Pfam Cyanobacterial and plastid NDH-1 subunit M 94 202 IPR018922 GO:0016655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4986 - - gmx:100527195 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4986 1 69804297 69805965 Lja1g4986 1 69804297 69805965 ECH