Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4985 ATGGCTTCCGCTCTCGGCGACAACTACAACCATCTCTCTCCTCCACAGCAAGAGCTGGTGAAGATTCTGTCGGAAAATGGCCAAGACCACCTGTTTCGCGATTGGCCAGGTCCCGGCGTCGACGACGACGAGAAGAAAGCGTTCTTCGACCAGCTGATTCGGCTCGATTGGAGCTACCCTGGTGGCTTGGGAGCGTACATCAAAAATGCTAAACGGCTCTTGGCTGATTCCAAAGCTGGCAAGAATCCTTTTGATGGCTTCACACCTTCCGTTCCAACGGGTGAGACATTGACTTTTGGTGATGAGAACTTCACCCAGTTTGAGGAGACGGGTGTGCGCGAAGCTCGAAAAGCTGCTTTTGTTCTTGTTGCTGGAGGTCTTGGGGAGCGTCTAGGATACAGCGGGATTAAGCTTGCTCTTCCTGCGGAAACCACTACTGGAGCATGTTTCTTACAGCATTACATTGAATCTATACTGGCACTTCAAGAAGCAAGCTCAGAAGGTGGAAGCCAGACACATATTCCTTTGGTTATTATGACCTCTGATGACACCCATGGACGTACCTTAGAGTTATTAGAATCAAATTCTTACTTTGGCATGCAAATCACACAAGTAACACTTTTAAAGCAGGAAAAAGTTGCATGCTTAGACGATAATGAAGCCAGGCTTGCATTGGATCCGCAAAACAGATACAGAATTCAGACAAAACCTCATGGACATGGTGATGTGCATGCACTTCTTTATTCCAGCGGTATTCTGAAAAAATGGTATGATGCTGGGTTGAAATGGGTTCTCTTTTTTCAAGATACAAATGGACTTCTCTTCAAGGCAATTCCATCAGCACTTGGTGTCAGTGCTTCCAAACAGTACCATGTCAATTCTCTTGCAGTACCTCGGAAAGCAAAAGAAGCTATTGGTGGAATCACCAGACTCACTCACACTGATGGGAGGTCTATGGTGATAAATGTGGAATACAATCAGTTAGATCCTCTTCTTAGAGCAAGTGGATACCCTGATGGCGATGTCAATTGTGAGACTGGCTACTCCCCATATCCAGGAAATATAAACCAATTGATTTTAGAACTTGGTCCTTACATTGAAGAGCTCTCAAAAACAGGAGGTGCCATACAAGAGTTCGTTAACCCAAAATATAAAGATGCCAGCAAAACTTCATTTAAGTCCTCAACTCGTTTGGAATGTATGATGCAAGACTATCCAAAAACATTGCCTCCATCGGCCAGGGTTGGGTTCACGGTAATGGAAACATGGCTCGCTTATGCACCTGTGAAGAATAACGCTGAGGATGCTGCAAAGGTGCCAAAAGGAAATCCATACCACAGTGCAACCTCTGGAGAAATGGCCATCTATCGAGCAAACTGCCTCATTCTTAGAAAGGCTGGTTTCCAAGTAGCAGATCCAGTAGTGCAAATTTTCAATGGGCAAGAGGTTGAAGTTTGGCCCCGCATCACATGGAAGCCAAAATGGGGTTTGACTTTCTCTCTGATCAAGAGCAAAGTCAGTGGACATTGCTCCATTTCCCAGAGGTCTACACTGGCCATTAAAGGTCAACAAATTTTTATTGAAAACCTTTCCTTAGATGGGGCTCTTATAATTGAGGCAGTTGATAATGCAGAGGTAAAGGTGGGTGGTTCAGTTCAAAACAATGGCTGGAGCCTTGAAACTATTGATCACAAGGATACCTCGGAGCCTGAAGCATTGAGAATCAGGGGTTTTAAATTTAACAAAGTTGAGCAGGTGGAGAAGAAATATTCTGAACCTGGCAAATTCCACTTCAATGCCTGA 1803 0.4476 MASALGDNYNHLSPPQQELVKILSENGQDHLFRDWPGPGVDDDEKKAFFDQLIRLDWSYPGGLGAYIKNAKRLLADSKAGKNPFDGFTPSVPTGETLTFGDENFTQFEETGVREARKAAFVLVAGGLGERLGYSGIKLALPAETTTGACFLQHYIESILALQEASSEGGSQTHIPLVIMTSDDTHGRTLELLESNSYFGMQITQVTLLKQEKVACLDDNEARLALDPQNRYRIQTKPHGHGDVHALLYSSGILKKWYDAGLKWVLFFQDTNGLLFKAIPSALGVSASKQYHVNSLAVPRKAKEAIGGITRLTHTDGRSMVINVEYNQLDPLLRASGYPDGDVNCETGYSPYPGNINQLILELGPYIEELSKTGGAIQEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGFTVMETWLAYAPVKNNAEDAAKVPKGNPYHSATSGEMAIYRANCLILRKAGFQVADPVVQIFNGQEVEVWPRITWKPKWGLTFSLIKSKVSGHCSISQRSTLAIKGQQIFIENLSLDGALIIEAVDNAEVKVGGSVQNNGWSLETIDHKDTSEPEALRIRGFKFNKVEQVEKKYSEPGKFHFNA* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4985 600 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 5 577 IPR039741 -
Lja1g4985 600 Gene3D - 468 588 - -
Lja1g4985 600 SUPERFAMILY Nucleotide-diphospho-sugar transferases 17 541 IPR029044 -
Lja1g4985 600 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 13 467 IPR029044 -
Lja1g4985 600 PANTHER UDP-SUGAR PYROPHOSPHORYLASE 5 577 - -
Lja1g4985 600 Pfam UTP--glucose-1-phosphate uridylyltransferase 108 265 IPR002618 GO:0070569
Lja1g4985 600 CDD UGGPase 118 432 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4985 K12447 - ag:BAD66876 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4985 1 69778212 69789271 Lja1g4985 1 69778212 69789271 ECH