Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4964 ATGGCGCTGGGGAAGAATTCCCGAGGCGAGAGGAGGAACTGCTCAACGGTCTCTGTAGCCGTGTTCGTTGCATTTTGCTTAGTTGGTGTATGGATTGTGATGTCATCCATTGATCCAATTCAGAATTTAGTCATGCAGGTATCTGAGACTGAGACCATAAATGAGGTGAAAGATATAGCTAGTGAAAGTGGTTCCAGGCAATATGAAGAGGGGTTAGGTGAAAATATACCAGAAGAATCAACAAGGGTAGATAGCCAGAACCATAAATCTCAGAGTGAAACTAGTCCAGGAAATCAGGATGACCGAAAAGGAATTGAAAATGTGTCTGATAATAGATCTGAATATAATCAGCATGAGGTTGTAAAGGACGTCTCAGGTAAAACAAATGATTTGGATAAGGGTCCAGGGAGTAAAATTGAGGAGAATGATCAAATTAGGCATGTCAAGCCAAGCATCGACAAGAAGCAGGAAGAATCACATGGATACTTAAATTCAGAATCTAGAGAAACAGAAACACTAGATGGTCAAATTAATGAAGAAGTCAGAGGATCAATGGAAAGTTTAGATGAAAGGGAATCTGATAAGAGCATAAATGGTAGTGAATTAGGGACAGAAAGTACTGCAGGTGAAACCATACAGCTAGATGAGAGGATTGGTGAGTCTGAGGAGGAGAAAGTCAAGGAAAATCTGCGTTCAAAGCCAGAACAAAGTGCTGGAGAGGATAACATGGAAAGCCATGAAAAAAGTCCAGCTTCTAAAGAAGTTTCTATCACCGGTATACAAACTGAAACTTTGATTGAAGCTAGCACTGAAAACACTGAAAAGGGAACTTTTTCAACTCAAGCTGCAGAGTTGCAGCATCGGAAGGATCCACACAAGTCTTCAGTCTCCATTGAAAGCACCAAATATGACTGGAAACTTTGTAATACAACTACAGGATCAGAATACATTCCTTGTCTTGACAATTGGCAAGCAATTAGAAGGCTTCACAGCATAATGAACTATGAGCACTGGGAGAGGCACTGTCCCGAAGAAACTCCCACTTGTCTTGTTTCTCTTCCTGAGGGCTATAGAATCCCAATTAAGTGGCCCAAAAGCAGGGAAATGATATGGTACAAAAATGCTCCACACACAAAGCTTGTAGAATCTAAGGGTCATCAAAACTGGGTCAAAGTTACCGGTCAATACCTTACTTTTCCTGGTGGCGGAACGCAGTTTAAAAAGGGTGCTCTTCATTACATTGAATTCATTCAGAATGCTCTTCCTAATATTGCTTGGGGGAAGAGAAGTCGTGTGATATTGGACGCTGGGTGTGGCGTAGCCAGCTTTGGAGGCTATCTGTTTGAAAAAGATGTTCTGACCATGTCATTTGCTCCTAAAGATGTGCATGAGGCCCAAGTGCAATTTGCTCTGGAACGTGGAATTCCCGCCATATTAGGTGCCATGGGCACCAAAAGATTGCCCTTCCCCGGTTCTGTCTTTGATCTTATCCACTGTGCACGTTGTAGAGTCCCTTGGCACATAGAAGGTGGCAAGCTACTCTTGGAGCTTAATCGTGTCTTGCGACCTGGAGGTTACTTTGTATGGTCTGCTACTCCAGTGTATCAAAAGGATCCAGAAAATGTTGGGATTTGGAACGCCATGGTTAAAATTACAAAGTCAATGTGCTGGGATCAGGTGGTGATTAAAAAGGACAAGTTGAATGGAGTGGCAGCGGCAATATATAGAAAACCAACTGACAATGAATGCTATAACAGAAGATCAACCAATGAGCCGCCATTGTGCAATGAATCTGATGATCCAAATACTGCTTGGAATATATCACTACAGGTTTGTATGCACAAAGTGCCTGTAGGTTCATCAGAGCGTGGATCAATCTGGCCTGAGCAATGGCCACTGAGGTTAGAGAAACCACCCTACTGGTTAAACTCTCAGGCTGGTGTTTATGGAAGATCTGCTTCAGTGGAATTCACTGCTGATCACAAGCATTGGATTAACCTTCTTTCCCACTCATATTTGAATGGAATGGGAATCAATTGGTCTTCAGTAAGAAATGTCATGGACATGAAAGCTGTTTATGGAGGGTTTGCTGCAGCTCTTAAAACCTTGAAAATAAATGTTTGGGTAATGAATGTGGTTCCAATTGATACTCCAGACACATTGCCAATAATATATGAGCGTGGCTTGTTCGGTATTTATCATGATTGGTGTGAATCTTTCAGTACCTATCCTAGATCTTATGATCTTCTCCATGCTGATTCCTTGTTCTCAAAACTGAAGGAAAGGTGCAACATAGTGGCAGTGATTGCAGAAGTTGACAGGATGCTGAGACCACAAGGATATTTGATCATAAGAGACAATGTTGAAACTATTGGTGAGATAGAGAGCATGACTAAATCTCTACATTGGGATATTCAGTTCACCTATTCAAAACTTGGGGACGGATTACTTTGCATTCAGAAGACATTGTGGCGTCCAACAGAGGTTGTAACCATTATGTCAGCCATTGCCTGA 2514 0.4193 MALGKNSRGERRNCSTVSVAVFVAFCLVGVWIVMSSIDPIQNLVMQVSETETINEVKDIASESGSRQYEEGLGENIPEESTRVDSQNHKSQSETSPGNQDDRKGIENVSDNRSEYNQHEVVKDVSGKTNDLDKGPGSKIEENDQIRHVKPSIDKKQEESHGYLNSESRETETLDGQINEEVRGSMESLDERESDKSINGSELGTESTAGETIQLDERIGESEEEKVKENLRSKPEQSAGEDNMESHEKSPASKEVSITGIQTETLIEASTENTEKGTFSTQAAELQHRKDPHKSSVSIESTKYDWKLCNTTTGSEYIPCLDNWQAIRRLHSIMNYEHWERHCPEETPTCLVSLPEGYRIPIKWPKSREMIWYKNAPHTKLVESKGHQNWVKVTGQYLTFPGGGTQFKKGALHYIEFIQNALPNIAWGKRSRVILDAGCGVASFGGYLFEKDVLTMSFAPKDVHEAQVQFALERGIPAILGAMGTKRLPFPGSVFDLIHCARCRVPWHIEGGKLLLELNRVLRPGGYFVWSATPVYQKDPENVGIWNAMVKITKSMCWDQVVIKKDKLNGVAAAIYRKPTDNECYNRRSTNEPPLCNESDDPNTAWNISLQVCMHKVPVGSSERGSIWPEQWPLRLEKPPYWLNSQAGVYGRSASVEFTADHKHWINLLSHSYLNGMGINWSSVRNVMDMKAVYGGFAAALKTLKINVWVMNVVPIDTPDTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADSLFSKLKERCNIVAVIAEVDRMLRPQGYLIIRDNVETIGEIESMTKSLHWDIQFTYSKLGDGLLCIQKTLWRPTEVVTIMSAIA* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4964 837 MobiDBLite consensus disorder prediction 183 198 - -
Lja1g4964 837 PANTHER METHYLTRANSFERASE PMT25-RELATED 11 833 - -
Lja1g4964 837 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 679 799 IPR029063 -
Lja1g4964 837 MobiDBLite consensus disorder prediction 252 284 - -
Lja1g4964 837 MobiDBLite consensus disorder prediction 72 86 - -
Lja1g4964 837 MobiDBLite consensus disorder prediction 215 251 - -
Lja1g4964 837 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 339 585 IPR029063 -
Lja1g4964 837 CDD AdoMet_MTases 433 528 - -
Lja1g4964 837 MobiDBLite consensus disorder prediction 58 293 - -
Lja1g4964 837 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 315 811 IPR004159 GO:0008168
Lja1g4964 837 MobiDBLite consensus disorder prediction 95 176 - -
Lja1g4964 837 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 11 833 IPR004159 GO:0008168
Lja1g4964 837 Gene3D Vaccinia Virus protein VP39 404 566 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4964 Lja-Chr1 69146609 69154313 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4964 - - gmx:100793395 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4964 1 69146609 69154313 Lja1g4964 1 69146609 69154313 ECH