Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4951 ATGGAGTTAGAGGTGCCTGTTGTGATTGTGGGTGCTGGTCCTGCTGGCATAGGAACCTCAGGGTGCCTCAACAAGCATTCCATCCCTAACATTGTCCTAGAAAGAGATGATTGCAATGCATCTCTTTGGAGGAAAAGGACCTATGATAGGTTGAAGCTTCACTTGGGCAAAGAATTTTGCAACCTCCCCCACATGCCATTTCCTTCAGGTTCGCCCAACTTTATCTCCAGAATTGATTTTTTACGCTACATAGATCGTTACGTGAGTCGTTTCATGATCAACATCCGGTATAACCGGAGCGTGGAGTCAGCCACCTACGACGACAAAAATGGGAAATGGAGGGTCATTGTGAGGGACACAGCCTCAAATGTTGATGAGGTTTATGTCGCTGATTACCTGGTGGTTGCGACGGGGGAGAATTGCGAAGGGATCATTCCCAAGATAGAGGGGCTTGAAGGATTTGAAGGAGAATACATGCATTGCAGCAAATACATGAATGGAAGGGCATGGTATGATATGAATGTTTTGGTTGTTGGTTGTGGGAATTCTGGCATGGAGATCGCTTATGATCTCTCAAATTGGGGTGCAAATACCTCCATTGTTATTAGAAGTCCTGTACATTATTTCACTAAAGAAATGGTGTTCATTGGAATGTCTTTGCTGAAATACATAGAAGTTGACAAGGTTGACAAGCTTATGGTGCTCATGAGCAAGCTGGTGTATGGGGATATGACTAAGTACGGCTTGACCAGGCCAAAGGAAGGACCTTTTGCTCTAAAAATCAAGGGGGGTCGTACCCCTACCATTGATGTGGGTTGTGTGTCAAGGATTAAGAAAGGCAAAGTAAAGGTGTTCCCAGGTATTACAGGCATAAAAAATGACAAGATGGTTGAGTTTGAGGATGGACGAATTGGTCAATTTGACGTTATAATCTTTGCCACCGGATACAAAAGCAATGTGCTGAAATGGCTTAAGGATTACAAAGGGATGTTCAATGAGAGTGGAATGCCTAAACCAAGATATCCATCACATTGGAAAGGAGAAAACAACATCTACTGTGCTGGGTTTTCAAAGAGGGGATTAGAAGGTATTGCTTATGATGCTCAGGAAATAGCAAATCATATCAGTTTGACTATGAATGCAAGGAATGTACCTAGTTCTATGGCCAATATTGCCGGAGTCGAGTAA 1188 0.4327 MELEVPVVIVGAGPAGIGTSGCLNKHSIPNIVLERDDCNASLWRKRTYDRLKLHLGKEFCNLPHMPFPSGSPNFISRIDFLRYIDRYVSRFMINIRYNRSVESATYDDKNGKWRVIVRDTASNVDEVYVADYLVVATGENCEGIIPKIEGLEGFEGEYMHCSKYMNGRAWYDMNVLVVGCGNSGMEIAYDLSNWGANTSIVIRSPVHYFTKEMVFIGMSLLKYIEVDKVDKLMVLMSKLVYGDMTKYGLTRPKEGPFALKIKGGRTPTIDVGCVSRIKKGKVKVFPGITGIKNDKMVEFEDGRIGQFDVIIFATGYKSNVLKWLKDYKGMFNESGMPKPRYPSHWKGENNIYCAGFSKRGLEGIAYDAQEIANHISLTMNARNVPSSMANIAGVE* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4951 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Lja1g4951 395 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Lja1g4951 395 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 383 - -
Lja1g4951 395 Gene3D - 4 384 IPR036188 -
Lja1g4951 395 Pfam Flavin-binding monooxygenase-like 7 317 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja1g4951 395 PRINTS Pyridine nucleotide disulphide reductase class-I signature 174 199 - -
Lja1g4951 395 PRINTS Pyridine nucleotide disulphide reductase class-I signature 6 28 - -
Lja1g4951 395 PRINTS Pyridine nucleotide disulphide reductase class-I signature 133 142 - -
Lja1g4951 395 SUPERFAMILY FAD/NAD(P)-binding domain 7 278 IPR036188 -
Lja1g4951 395 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED 4 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4951 Lja-Chr1 68786672 68789309 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4951 K11816 - gmx:100818396 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4951 1 68786672 68789309 Lja1g4951 1 68786672 68789309 ECH