Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4932 ATGTGTACTTCTGAAATGGATATTTGGGATAGTTTGTGGGTTGTGCAATTTATGCAGATGCTGGGTTTGTTTAGTTCTTGGGTCTCATTTTCAAAGTTTAGGACTTTATTGTCAAGAGCTTTTGGTTTTGGTCAGAATATTGTTAAGGAGAAATGCAATGCATCGTGGATCTTAGTTTCTTTCAATGGGGTAGTCACAACTGGGTCATTGATATCCTTAATCTTGGTCCTTTCCTGGGCATATTCATATGCATTTCCTAGTCCTCACTCTGTGGCTCAGAGTTTTGAGATTCCCAACAGTTCTCACACACTGGTTCAGAGCTATGAGGTTCTGAAATCCAATGTTTCTGTGGGTGCCTGCAACGTGTTTGATGGAAGTTGGATAAGGGATGATGGCTACCCTTTATATGATGCTTCTCACTGCCCTTTTGCAGAAAGGGGTTTTAATTGCTTTGCTAATGGGCGTAAGGATAGAGGCTACACAAAATGGAGGTGGAAACCCAAGAATTGTGACATTCCAAGGTTTGATGCCCGTGGAATACTTGAACAACTTCGTGGGAAAAGGGTGGTTTTTGTTGGCGATTCGTTGAGCCGGACGCAATGGGAGTCCTTGATTTGTTTGCTGATGACAGGAGTTGAGGATAAGAAGAGTGTGTATGAAATCAAAGGCAATAAGATCACAAAGCAGATTAGGTTTTTAGGTGTGAGATTTAGTACTTTTGATGTTAGAATTGATTTTTATCGATCAATTTTCCTGGTGAAGCCTGGTCCTGTGCCTAGACATTCACCCCAAAGGGTGAAGACAACACTGAGATTGGATAAGATGGATGATATTAGCCATGAGTGGATTGATTCAGATGTTCTCATATTCAATTCAGGTCACTGGTGGTCAAGGACTAAGCTTTTTGACATGGGCTGGTACTTTCAGGTTGGTAACTCACTGAAGCTTGGAATGCCAATTAATTCTGCTTTCAACACAGCTTTACTCACCTGGGCCTCTTGGGTAGAGAATACAATTAACACAAACAGGACAAGAGTATTCTTCCGTACCTTTGAATCATCTCACTGGAGTGGACAGAACCGCCACGCTTGCAAGGTGGCCCGAAGGCCTTGGAAGAGAACAAATGGCAGGGACAAGAGTCCAATTTCAGACATGATCAACAGAGTTGTGAAAAAAATGACTGTTCCTGTGACAGTTCTGCATGTTACACCCATGGGAGCATATAGGAGTGATGGACATGTGGGTACATGGAGTGACAAGCCATCTGTGCCAGATTGCAGTCATTGGTGTCTACCTGGTGTTCCTGATATGTGGAACGAAATTCTCTTCTCATATTTGCTACCAAAAGATGGAGCAAATTAA 1362 0.4244 MCTSEMDIWDSLWVVQFMQMLGLFSSWVSFSKFRTLLSRAFGFGQNIVKEKCNASWILVSFNGVVTTGSLISLILVLSWAYSYAFPSPHSVAQSFEIPNSSHTLVQSYEVLKSNVSVGACNVFDGSWIRDDGYPLYDASHCPFAERGFNCFANGRKDRGYTKWRWKPKNCDIPRFDARGILEQLRGKRVVFVGDSLSRTQWESLICLLMTGVEDKKSVYEIKGNKITKQIRFLGVRFSTFDVRIDFYRSIFLVKPGPVPRHSPQRVKTTLRLDKMDDISHEWIDSDVLIFNSGHWWSRTKLFDMGWYFQVGNSLKLGMPINSAFNTALLTWASWVENTINTNRTRVFFRTFESSHWSGQNRHACKVARRPWKRTNGRDKSPISDMINRVVKKMTVPVTVLHVTPMGAYRSDGHVGTWSDKPSVPDCSHWCLPGVPDMWNEILFSYLLPKDGAN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4932 453 Pfam PMR5 N terminal Domain 119 171 IPR025846 -
Lja1g4932 453 PANTHER LEAF SENESCENCE RELATED PROTEIN-LIKE 53 447 - -
Lja1g4932 453 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 53 447 IPR029962 GO:0016413
Lja1g4932 453 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 172 444 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4932 Lja-Chr1 67972535 67975006 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4932 - - gmx:100802445 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4932 1 67972535 67975006 Lja1g4932 1 67972535 67975006 ECH