Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4927 ATGGATTTGGTTAAAGCTTCAAGCCTGAAACCATGGCGAATTCCTTCACCGCCACTAATTAACATCACCACTTCGACTGCTACCACCTTCTATTTCTCTCCTCGCTCTTCAAAAAATTTCTCGTTTCCATTTTCAACCTTTCAAGTTCAACACACTCAGTTAAAGCCCCTAATTCTCCATGGCAAGAAGAGAAACTCCTCTGATTCCGAACCAGTTCTCGAACCCACCATCGTCCAAGAAGTATCAATGGATGAAGAAGAAGACGATGAATTCGATTACGAGGAACCACTGAACGACGAGGACGAGGACGGTGACGAGTACTATGACGACGACGAACAAGAAGAAGAAGAGTTTGAGGATGAAGATGAGGATAGTGTGCCCTATGCAGGTGATGGGGGTTCAGGTGGTGGAATTTCCCTTGCCGGATCATGGTGGGATAAAAAGGCACTAGCTATTGCTAAAGAGGTTACTGAGTCTTTTGATGGTGATTTGCAAATTTATGCTTTTAGAACGCTGCTGCGTAACTCCGCCATTCAAGTTCGCATTGAGAAGCTTTCCAACAAGTCTGGCTCCCCCAACATAGAAGATATTGAAGCCTTTTCTACAACCTATAGAGCAAAATTGGATGAAGCAGAACTTACCAAATCTGTTCCGGAGAATTTAACTTTGGAGGTGTCTTCTCCTGGTGTGGAAAGAGTAGTTCGGATTCCAGATGACCTAGACCGATTCAAGGACAGATCTATGTATGTGAGATATGCCATAGATGATGATGATTCCATGAATCCATCTGCAGAAGGTGATGGTGTGTTCAAGCTTGAATCCTTTGACTTGGATACAAAATATTGCACCTGGAGTTTAGCAGACGTGAGAGTTAACAGAGAGAAAGCAGGGAAAGGAAGACCACTGAATAAAAAGCAAAGAGAATGGCGTTTAAGCACTCCCTTTGATTCCTTACGTTTTGTACGGTTGCACTCCGGCACTTGA 984 0.437 MDLVKASSLKPWRIPSPPLINITTSTATTFYFSPRSSKNFSFPFSTFQVQHTQLKPLILHGKKRNSSDSEPVLEPTIVQEVSMDEEEDDEFDYEEPLNDEDEDGDEYYDDDEQEEEEFEDEDEDSVPYAGDGGSGGGISLAGSWWDKKALAIAKEVTESFDGDLQIYAFRTLLRNSAIQVRIEKLSNKSGSPNIEDIEAFSTTYRAKLDEAELTKSVPENLTLEVSSPGVERVVRIPDDLDRFKDRSMYVRYAIDDDDSMNPSAEGDGVFKLESFDLDTKYCTWSLADVRVNREKAGKGRPLNKKQREWRLSTPFDSLRFVRLHSGT* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4927 327 MobiDBLite consensus disorder prediction 61 133 - -
Lja1g4927 327 Pfam RimP N-terminal domain 157 231 IPR028989 -
Lja1g4927 327 MobiDBLite consensus disorder prediction 80 127 - -
Lja1g4927 327 SUPERFAMILY YhbC-like, N-terminal domain 152 231 IPR035956 -
Lja1g4927 327 PANTHER OSJNBA0006B20.18 PROTEIN 1 325 - -
Lja1g4927 327 Gene3D - 146 228 IPR035956 -
Lja1g4927 327 PANTHER OSJNBA0006B20.18 PROTEIN 1 325 - -
Lja1g4927 327 Hamap Ribosome maturation factor RimP [rimP]. 147 327 IPR003728 GO:0042274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4927 Lja-Chr1 67801741 67805734 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4927 - - gmx:100783320 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4927 1 67801741 67805734 Lja1g4927 1 67801741 67805734 ECH