Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4925 ATGGGTTTGATGGATATTCTATGTTCTTCCATATTTCTTTTTACGGTCGTTGAGTCCACTAGCAGATTCGGGAGTATGCGGCCCTTAAACATAGGTGTGGAGTCTGCAGGAGCAGTCAGCTGGACAGTCTTCAGTTCAAGTATATTTGTGCTTGTTGCTCTTGTTCTCTCCATGTATCTAATATTCGAGCATCTAGCTGCCTATAATCAGCCCGAGGAGCAGAAGTTTTTGATTGGTCTCATTTTAATGGTTCCTGTTTATGCATTGGAATCGTTTTTGTCGCTATTGGATTCCAGTGCTGCATTCAACTGTGAAGTTATCCGGGACTGCTATGAGGCTTTTGCATTATATTGCTTTGAAAGATACTTGATCGCTTGCTTAGGTGGTGAGGACAAAACAATTCAATTTATGGAAAGATTGAGCCTAACAGACTCCAGCACTCCTCTCCTGAAAGAAGCATACGCATATGGAGTTGTAGAGCATCCGTTTCCTTTAAATTGCTTCTTAAGAGATTGGTATCTTGGTCCTGACTTCTATCAATCTGTGAAAATTGGCATTGTACAATATATGATGCTGAAAATGATCTGTGCATTGCTGGCAATGCTCCTCCAGTCTTTTGGGGTTTATGGAGAGGGGAAATTTGATTGGAGATATGGGTATCCCTACTTGGCAATTATTCTTAATTTTAGTCAGACATGGGCCCTGTATTGCCTTGTGCAGTTCTATTCTGTTATTAAAGATAAACTGGAGCCAATCAAACCATTAGCAAAATTTCTAACCTTCAAGTCAATTATCTTCTTGACATGGTGGCAAGGTGTGGCTGTTGCATTTCTTTTTTCTATGGGAGCATTTAAAGGGTCATTGGCTCAAGAGCTAAAAACACGTATACAAGATTATATCATCTGCATAGAGATGGGCGTTGCTGCTGTTGTGCACCTTTATGTCTTTCCTGCAGTACCTTACAAAAGAGGAGACAGGTGTTTTCGCAATGTAGCAGTGATGGCTGACTATGCATCACTAGGATCACCTCCTGATCCTGCAGAGGTTCGAGACAGTGAGCGCTCAACTAGAATGCGACTGGGTCGACATGGTGAGAAAGATAAGCAGCGTATGAGATTTACCCATAATGTTCGTGATGTGGTTCTCGGAAGTGGTGAAATTATTGTAGATGACGTGAAATTTACTGTTTCACATGTGGTCGAACCTGTTGAAAGGGGTTTTGCCAAGATAAACCAAACCTTTCATCAGATATCAGAAAATGTGAAACGCCATGATGAGGAGCGGAGGAGAAACACCAAGGATGATAGTTACCTTATTCCCTTGCGTTCATGGACAACTGAATTTTCTGATGTTCGTGATACACTTGTGGAAGGAAGTGGAAGTGTAAGTGATAGTGGTTTGTCTAGTGGAAAGAGACATGTCCAATCCAAAGCATCAAGCTCCAGGATGAGAAGATAG 1458 0.4163 MGLMDILCSSIFLFTVVESTSRFGSMRPLNIGVESAGAVSWTVFSSSIFVLVALVLSMYLIFEHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSSAAFNCEVIRDCYEAFALYCFERYLIACLGGEDKTIQFMERLSLTDSSTPLLKEAYAYGVVEHPFPLNCFLRDWYLGPDFYQSVKIGIVQYMMLKMICALLAMLLQSFGVYGEGKFDWRYGYPYLAIILNFSQTWALYCLVQFYSVIKDKLEPIKPLAKFLTFKSIIFLTWWQGVAVAFLFSMGAFKGSLAQELKTRIQDYIICIEMGVAAVVHLYVFPAVPYKRGDRCFRNVAVMADYASLGSPPDPAEVRDSERSTRMRLGRHGEKDKQRMRFTHNVRDVVLGSGEIIVDDVKFTVSHVVEPVERGFAKINQTFHQISENVKRHDEERRRNTKDDSYLIPLRSWTTEFSDVRDTLVEGSGSVSDSGLSSGKRHVQSKASSSRMRR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4925 485 Pfam Organic solute transporter Ostalpha 44 321 IPR005178 -
Lja1g4925 485 MobiDBLite consensus disorder prediction 342 367 - -
Lja1g4925 485 PANTHER ORGANIC SOLUTE TRANSPORTER SUBUNIT ALPHA-RELATED 13 479 - -
Lja1g4925 485 MobiDBLite consensus disorder prediction 347 367 - -
Lja1g4925 485 MobiDBLite consensus disorder prediction 459 476 - -
Lja1g4925 485 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 13 479 IPR005178 -
Lja1g4925 485 MobiDBLite consensus disorder prediction 459 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4925 Lja-Chr1 67778771 67784880 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4925 - - gmx:100804401 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4925 1 67778771 67784880 Lja1g4925 1 67778771 67784880 ECH