Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4918 ATGGCATCACCAAGTGTTGAGAAGGACAAGTACCGCACCTATTTGCACGGAGATCAAGAGAAGAACACCAAATGGAGATTTGGTGCCCCACCTAACTATGAGGCTGTGAATAAGTTATTTGAAGAAGGCAGAACCAAGGAATGGCCTCCTGGATCACTTGAAGAGCAGGTGCAGACTTTAGTAAAAAATTGGGAAATGGAATTTTTCCACAAAGTTGATATAAACGATTTCAGATCAATTGATCCTAAGAAATTTACTTTCAGCCTAAATGGGAGAAAGCCTATGAGTTTGGAAGAGATAGGGGAACTTGGTGGAGGCTACATTCCCATGTTATATTCATCTCACATAGCTTTTACTACTACTTTACCAAGAGGGTTTGCTTTGGAGATTCTCCAAGTGTATTCTGGACCACCAGTAATTGTCTACAAGTTTAGACACTGGGGCTACATGGAGGGTCCTTTCAAAGGCCACGCTCCAACTGGAGAAAAAATTGAATTCTATGGAATGGCTATTTTCACGTTGGATGAGGATTCGAAAATCGTGAAGGTGGAGTTCTTTTTTGATGCAAATGAACTGATTGGAGGTCTTCTTAAAGGTCCTGAGTTTGATGGTAGTACTGAAGGTGGTGTTTCAAGTTGTCCTATTCTCAGGAACACTGGGTAG 663 0.4148 MASPSVEKDKYRTYLHGDQEKNTKWRFGAPPNYEAVNKLFEEGRTKEWPPGSLEEQVQTLVKNWEMEFFHKVDINDFRSIDPKKFTFSLNGRKPMSLEEIGELGGGYIPMLYSSHIAFTTTLPRGFALEILQVYSGPPVIVYKFRHWGYMEGPFKGHAPTGEKIEFYGMAIFTLDEDSKIVKVEFFFDANELIGGLLKGPEFDGSTEGGVSSCPILRNTG* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4918 220 PANTHER PATHOGEN-RELATED PROTEIN-LIKE 113 220 - -
Lja1g4918 220 Gene3D - 52 196 - -
Lja1g4918 220 PANTHER PATHOGEN-RELATED PROTEIN-LIKE 1 113 - -
Lja1g4918 220 SUPERFAMILY NTF2-like 117 191 IPR032710 -
Lja1g4918 220 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 1 113 - -
Lja1g4918 220 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 113 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4918 Lja-Chr1 67690857 67692137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4918 - - gmx:100805093 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4918 1 67690857 67692137 Lja1g4918 1 67690857 67692137 ECH