Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4906 ATGAAGAGGACCAGAGATATGGAGAAGAGGTCAGAAATAAACTCTGCCATTGAAGAGCTTTCCATGCTGGTTATAGTCAAACCTGGATCAAATCAAGAGGATGCACACATCCCCACCAAGCCTTTCCTATCACTATGTTACTTGATTGTACAAGTTCTTGATAAGATTGGGCCAACAATGGCTGTTTTGAGACAAGACGTTTACCAAAATATCAAGAGGTTGGAAGCCATGCATGAATCAAATCCCTCAGTGAATTCAAATTTGGTTGAGATATTGAAATCAGAAGCTAGCAAAGGCAACGCCAAGTCAACGTGGTGTAGCTGCAGTAAATCCTTTGTTTGGCTCACTAGATCCCTAGATTTCTCCTCAGCCTTGTTACAAGCACTAGCAAAAGATCCTAAAAAGAATATGGAGCAAGCAGTTCAAGAATCTTATGCTGCAACTTTGACACCATGGCATGGATGGATTGCATCAGCAGCTTTCAAGGTGGCTGTAAAACTAGTGCCTGATACTGAAACTTTCGTGGATCTCCTCAGGGGGAAAAATGAAGACTATGAGACCCTAAAGGAGAATATGCAGATCCTGGTTTCTTTGCTTGTGCCTTTTCTTGAGGATATCCATTGTCTTCTGAAAGCATATGACTTGGACAAGCTTAAGTCAAGCTGA 666 0.4174 MKRTRDMEKRSEINSAIEELSMLVIVKPGSNQEDAHIPTKPFLSLCYLIVQVLDKIGPTMAVLRQDVYQNIKRLEAMHESNPSVNSNLVEILKSEASKGNAKSTWCSCSKSFVWLTRSLDFSSALLQALAKDPKKNMEQAVQESYAATLTPWHGWIASAAFKVAVKLVPDTETFVDLLRGKNEDYETLKENMQILVSLLVPFLEDIHCLLKAYDLDKLKSS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4906 221 Pfam Glycolipid transfer protein (GLTP) 37 178 IPR014830 GO:0005737|GO:0120009|GO:0120013
Lja1g4906 221 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 4 218 - -
Lja1g4906 221 Gene3D Glycolipid transfer protein 1 217 IPR036497 -
Lja1g4906 221 PANTHER GLYCOLIPID TRANSFER PROTEIN (GLTP) FAMILY PROTEIN 4 218 - -
Lja1g4906 221 SUPERFAMILY Glycolipid transfer protein, GLTP 32 218 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4906 Lja-Chr1 67524219 67526360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4906 12 203 Acyl Lipid Metabolism Gene Families AT2G34690 20.207 5.00e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4906 - - gmx:100527808 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4906 1 67524219 67526360 Lja1g4906 1 67524219 67526360 ECH