Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4883 ATGGCAGAGACCCTTCGCATGGCTGTTGCTGTTCTTGGCAATGCTGCCTCAGTGTCACTTTATGCTGCACCAATGGTCACGTTTAAAAGGGTGATAAGGAAGAAAAGCACAGAGGAGTTTTCATGCATCCCTTACATCATTGGACTGTTGAACTGTCTCCTCTTCACTTGGTATGGATTGCCTTTTGTTAGCAACAAGTGGGAAAATTTCCCTCTCGTCACGGTTAATGGCGTCGGTATCGCTCTTGAGTTGTCTTATGTTCTCATATACTTCTGGTTCGCTTCCTCCAAAGGAAAGGTGAAGGTAGCCATGATCACGATTCCAGTTCTGCTTGTGTTCTGCATAACTGCTGTGGTATCAGTTTTTGCCTTCCATGATAGTACTCACAAAAAGCTACTTGTGGGTAGCTTAGGCTTAGGTGTTTCCGTTGCAATGTACGGATCTCCTCTGGTAGCAATGAAGAAGGTTGTACAAACAAAGAGTGTGGAGTTCATGCCACTACCATTATCCATATGCACATGTTTTGCTAGTACACTCTGGTTAACTTATGGGATCCTCATTCGTGATATTTTTGTTGCGGGGCCAAGTGTGGTTGGAGTTCCATTAGCCATACTTCAGATAGTCCTTCACTGCAAATACCGTAAGAGGAGTGTTGCTGAAGAACCAAACAAAAGGGACATGGAAAAGGGTAACTTGGAGAAGGTGGACATTGAAATTGGGGAAGTGGAAAAGGATGTCACAAATCATCATGATAAGGCCAACTCGTGA 768 0.4414 MAETLRMAVAVLGNAASVSLYAAPMVTFKRVIRKKSTEEFSCIPYIIGLLNCLLFTWYGLPFVSNKWENFPLVTVNGVGIALELSYVLIYFWFASSKGKVKVAMITIPVLLVFCITAVVSVFAFHDSTHKKLLVGSLGLGVSVAMYGSPLVAMKKVVQTKSVEFMPLPLSICTCFASTLWLTYGILIRDIFVAGPSVVGVPLAILQIVLHCKYRKRSVAEEPNKRDMEKGNLEKVDIEIGEVEKDVTNHHDKANS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4883 255 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 250 - -
Lja1g4883 255 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Lja1g4883 255 Pfam Sugar efflux transporter for intercellular exchange 9 97 IPR004316 GO:0016021
Lja1g4883 255 Gene3D - 133 226 - -
Lja1g4883 255 Gene3D - 10 107 - -
Lja1g4883 255 PANTHER RAG1-ACTIVATING PROTEIN 1 4 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4883 Lja-Chr1 66786106 66788380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4883 1 248 Miscellaneous Gene Families AT5G53190 49.035 1.81e-91 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4883 K15382 - gmx:100813119 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4883 1 66786106 66788380 Lja1g4883 1 66786106 66788380 ECH