Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4853 ATGGGTGCGGAGTCATGGTTTCATAGTTTGTGGAGGATTCCTCGGAAGCATGATGCTAATTCTGAGAAGTTGGTAATTGGAGTATTAGCATTTGAAATAGCAAGCTTGATGTCCAAGGTGGTTAATTTATGGCAATCATTGAGTGATAAACAGATTGCTAGGTTGAGAGAGGAGACCACTGATTCAATTGGCCTAAGAAAGCTTATTTCAGATGATGAGAATTTCATTGTACGCTTGATCTGTGTAGAGAAACTTGAGAATATGGCACATGTGGCAGAGTCCGTGGCTAGGCTTGGGAAGAAATGCAGCGATCCAATTTGGAAAGGTTTCGAGAATGCCTTTTATGAGTTTATTGCTATGGGTGTTGATCCATATGGGTGGGAATTTACTGGCAAGAAGATGGAGAAAAATATTAAAAAGATGGAAAGGTTTATATCAACTAATGCAACTTTGTATCAAGAGATGGAGCAATCTCTTACAAGATTGAAGACTAATGGTGAGTCAAGTGTGTTAGATTTAATTGAGTATCAGAAGATGGTTGCATGGAAGACACAGGAGGTGAAGCACTTGAAGGATATTTCTCTGTGGAACAAGACATATGATTACACAGTACATCTTTTAGCAAGATCGTTATTCACAATATACCGAAAGATTAGCCAGGTATTCGGAGTTCAGGAGATTGTAGATGTGATCTATCAAAAAAGAAACGAGATTGTAGATGTTGGTGGAATCGATAATTCAAGTGTCTTAAATTCAGATTTAATTCATAGAAGTAAATTTTCTGCTCTATTGCAATCTCCTCCACCGAAAACCCTTGGTGCTGCTGCTTTAGCACTGCATTATGCAAATGTCATCATAGTGATTGAGAAGCTGGCGGCTTCTCCGCACTTGATCGGTCTCGACGCAAGGAAAGACCTGTACAACATGCTACCTAGACGCGTGACAGCTGCCCTTAGGGGCAAGTTGAAGCCATATACCAATACCATGGCCTCTTCATTAGGGTATGACCCGAGTCAGGCAGAAGAATGGACTCAAGCAATGTCAAGCTTATTGGAATGGTTGGCACCGCTTGCTCATCACATGATAAGATGGCAATCTAAGAGGAGTTTCGAGCAGCAAAGCTTTGTTTCCAGGACGAATGTGCTGCTGGTGCAGACCCTTTACTTTGCAAACCAAGAAAAGACGGAACAGGTAATCACGGAGCTTCTTGTGGGTCTGAACTATGTCTGGAGATATGGTATGGAGCTCAATGCAAAAGCTCTAGCAGAGTGTGGCAGTTTAAGGGTAGACAATGGATATCCTAATCTGAATGGTTAA 1317 0.4146 MGAESWFHSLWRIPRKHDANSEKLVIGVLAFEIASLMSKVVNLWQSLSDKQIARLREETTDSIGLRKLISDDENFIVRLICVEKLENMAHVAESVARLGKKCSDPIWKGFENAFYEFIAMGVDPYGWEFTGKKMEKNIKKMERFISTNATLYQEMEQSLTRLKTNGESSVLDLIEYQKMVAWKTQEVKHLKDISLWNKTYDYTVHLLARSLFTIYRKISQVFGVQEIVDVIYQKRNEIVDVGGIDNSSVLNSDLIHRSKFSALLQSPPPKTLGAAALALHYANVIIVIEKLAASPHLIGLDARKDLYNMLPRRVTAALRGKLKPYTNTMASSLGYDPSQAEEWTQAMSSLLEWLAPLAHHMIRWQSKRSFEQQSFVSRTNVLLVQTLYFANQEKTEQVITELLVGLNYVWRYGMELNAKALAECGSLRVDNGYPNLNG* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4853 438 Pfam Domain of unknown function (DUF3475) 28 84 IPR021864 GO:0045927
Lja1g4853 438 PANTHER BNAC09G50660D PROTEIN 264 437 - -
Lja1g4853 438 PANTHER BNAC09G50660D PROTEIN 1 266 - -
Lja1g4853 438 Pfam Protein of unknown function (DUF668) 271 363 IPR007700 GO:0045927
Lja1g4853 438 PANTHER PLANT/T32M21-140 PROTEIN 264 437 - -
Lja1g4853 438 PANTHER PLANT/T32M21-140 PROTEIN 1 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4853 Lja-Chr1 66214571 66217698 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4853 - - lja:Lj1g3v4107070.1 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4853 1 66214571 66217698 Lja1g4853 1 66214571 66217698 ECH