Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4848 ATGCCGCGCAGTTCGAAGCACAAATCGAGCAAGCATAGTTCCAGGGACTACTCCGATTCCGAGAGAGATTCCATTGTTAAGGATCGGAGGAGCAGCAAGGAGGATGGCGGTAGCGGCGTGAAGGCGTCTAAGGATTCGGGCTCTGGTGAGAAGAGGAGGCTGGATTCGAAGGACGCGGCGGCGGCTGCGCATGGGAACGGGGAGTATTCTGATGAGTACGCTTCGTCGTCGAAGCGGCGTAGGGATGGAGGTGGAGGTGGAGGGGATAGGTGGAATGGCGGGGAGGAAGGGTCGAAGAAGTCGAAGACCGTCGGGGATTCGAAGAGTAGGAGGAGGGATGAGGGCGTGGTGGAAGGCGAGGAGGTGAAGAGGAGTGGTAGCGGGAAGCATAGGGATTCGTCGTCATCCGGTCGGAGAGAAGGTGTGGCGGAGAAGGAGAAGGAGAGGAAGTTGAAGGATGGTAGAAGTGAGGAATCTGTGGAGATTGATGACCAGGATCAGCGCTTGTCAAAGCAGGTTTTTGAAAATAATGATTCAAAGAAAATTGATGAGTTGCGAAGCCCTGAACTTGATAACCAGCTTGAGAGGCGAATGAGGAAGAAAAGAGATGACTATGGTGATGGTGATAAGCATCAGGATGATGTTGGGGATGGTTATGATAGACGTTTGTCTTCTAGGGATGACATTGCCAAGGATGGAAAGAAGAAGGATGATAGACGAAAAGATGAGAAATATAGAGACAAATACAGGGAAGAAATGGACAGGGAGAACAAACATCGACATGACAAGCAACGTGATGAGCGCCCTGCAAAAGATCATACTTCCATTAGGTCTGATGATAAGTATACTAGGGAAGAAAAGAATAGTTTAGAATCACGACAAAAGAGAACAAAGCATCCAGAAGGTGATAGGGACCATTATCATGATCGGGATGGAGAACGAGACCGAGACCGTGATTCTGAATCTGTTCGTGATCGTGAGCGCCATAATGAACGTGATCATGATTATGATCATGACAGGGATCATGATTATGACAGAGAGCGAGATTGGGACTGGGAACATGACCGAGACAGAGACCGTGATCGCCACCGTGATCGTGATGGGTCACATGTGGATGATAGAAGTGCTAGAGGCAAAGAGAGTGGGACAAAGAAAAAAACTTTTGATGATCGTGATGATTATAGTGACTCTAAATCTAGAGCTGTCAAGAGCTACTATCCTGATGCTGAGAAGAGGACTTTGAGCAGCAATAGAGCTGATTCTGATGTTGACAGGGGAAGATCTCAATCTCGACATGCCCATGCAGATTCCACTGGGACTAGCAACAAACACCGATCCTCTCCTGCCTCAAATACACATATTGGCAAAGATGAACATAGAAATGCAAATGCTGAAGATTCAAAGTATAGAGACTCAACAGTAGAACAGAGAACCAAAAGTTCAAGAGAGGGCTACTCTGGGATTTCAGATAGAGGCCCTAAATACAAATCAATGGATAAACCCATTAAAATAGATGAATGTCCTGCAGGGGACTTGTCAACTGAAAGGTCTTCCAGTGCGAAGGCTTCACCCATGGGCCTGATTGAAAGATCTCCTTCATCAACTAGCATCGAGCGCAGATATGTGAATAAAAGTGGTGTTAAGCGGAATCTTGAAATTGATGAAAGTGGAAGGAGGAGCAGTAATGATGGAAGAGATTTCTCTACTTCTGATGATAGACATGGCCGGGAATTGACTCTAGAGAAACTGGATGAGCCCTCTCAAGCAGACTCATCTTTCTACAGTAGGACTAATCAGAGCAATCCACCAGTGATTCCTACCCCACCTGGTTTCAGGACTGCATTAGACAGGCCTTTTACAGGTTCCATGGAGGACGATGTTAGAGATAACTCTAATACACGGTACAGAAGAAGTAGTGAACATGGATTTGGAAGAATGCATGGCGGTAATTCCTGGAGGGCAGTTCCAAACTGGACTTCACCAGTACCCAATGGATTTGTTCCGTTCCCCCCTGGGCCAGGTCATGGAGGTTTTCAAGCAATGATGCCACAGTTTGCATCTCAACCTCTTTTTGGCATTAGGGCTCCGATGGAAGTCAACCATGCTGGCATTCCTTACCATATTGCTGATGCTGACAGGTTTCCAGGTCACTTGCGTCCACTTGGGTGGCCAAATATGATGGATGGTACTGGACCTGCTCATTTGCATGGATGGGATAACAGTAATGGTGTCTTTAGAGATGATACTCAAATGTATGGTGGTTCTGATTGGGACAGGAACAGGCATTCAACAAATAGTCATGGATGGGAATCTGGTTCTGAGACTTGGAAAGAACAGAATAGTGATTCAAAGAAAGACTTACCTTCCCCAGCCTGCAAAGATGAATCAGTTCCTGCTGTGGTTGACAATGGTTTGACTGATCAGACCATCCGTATGTCTCAGGATGAGCATAACCGGGATGAATTTCATGATAAGTCTCCTGAAACTAAGCTGACCAGTGTAAATTCCCCTGAAAAAGTACCTTTGAACTCTTCACCCACAGCTGCTCTTGAAAAGGTGCCTGATACTTCTACACCAAGTGACAATACTACTCTTCTAAGCCGGTTCTACCTCTCCAAACTTGACATTTCAGTAGACTTAGTACTGCCAGAATTGTATGACCAGTGTATGTATACTCTGAATATTGGCAAGCCCGTGGATGCAGTTGCTAGTACAGAACTATTATTGAAGAACGGTTCGAGTGCACGGCAGAAATTAGCTGCCTCTTCATCAAAGCGACCTTTTCCAGCAATTGATAATTCTATCTTCCAGAGAGCCATAGGCATTTACAAAAAGCAAAGGGTGAAACTGCCTAATGGGGGTGATGTAGATGTAATTGCAGTATCCAACCAGGTGCAAGTGAACGAGTCTGTTCCTGTTCCTGGTTTGGAGAATAGGCAAATTTCTGTCTCAGCTTCTGATGGAACAAAAGATGTACTAATGCCTACATTAGAACCAAATAAAGTCGAAGTCCTATCCCCTGCAAAGGAGCATTTGGAAGAGATCAATCAAACATCCAGCCCAATGGAGCAAGATCATGATTGCACCCATTCTTTGAAGACAGGCATGTATAGTCCATCTTCTGGTGCCGAGAACCAAGAGGCAGGTTTGGGAGCCCCAGAGAATGATGTCACTTCTGATAAGGTGAATTCAGGGGACGCGGAGGAGATTCACTCCACGGCATCCAAAGATGAAGCTGAGTTACCCCCCATGGCATCCAAAGATGAAGCTGAGTTACCCCCCATGGCATCCAAAGATGAAGCTGAGTTACCCCCCACGACATCCAAAGATGAAGCTGAGTTACCCCCCACGGCATCCAAAGATGAAGCTGAGTTACCCCCCACGGCATTCAAGGATGAAGCTGAGTTACCCCCCACGGCATCCAAAGATGAAGCTGAGTTACCCCCCACGGCATTCAAGGATGAAGCTGAGTTACCCCCCACGGCATCCAAAGATGAAGCTGAGTTACCCCCCAGATTGCAGGAAGAGAGTGATGACATGAATACCAAAGCCACACCTACTGATTCTGCCCAGTGTGCAGATGAAAAGCTGGGTTTTGGTGACACAAAGATATAA 3615 0.4658 MPRSSKHKSSKHSSRDYSDSERDSIVKDRRSSKEDGGSGVKASKDSGSGEKRRLDSKDAAAAAHGNGEYSDEYASSSKRRRDGGGGGGDRWNGGEEGSKKSKTVGDSKSRRRDEGVVEGEEVKRSGSGKHRDSSSSGRREGVAEKEKERKLKDGRSEESVEIDDQDQRLSKQVFENNDSKKIDELRSPELDNQLERRMRKKRDDYGDGDKHQDDVGDGYDRRLSSRDDIAKDGKKKDDRRKDEKYRDKYREEMDRENKHRHDKQRDERPAKDHTSIRSDDKYTREEKNSLESRQKRTKHPEGDRDHYHDRDGERDRDRDSESVRDRERHNERDHDYDHDRDHDYDRERDWDWEHDRDRDRDRHRDRDGSHVDDRSARGKESGTKKKTFDDRDDYSDSKSRAVKSYYPDAEKRTLSSNRADSDVDRGRSQSRHAHADSTGTSNKHRSSPASNTHIGKDEHRNANAEDSKYRDSTVEQRTKSSREGYSGISDRGPKYKSMDKPIKIDECPAGDLSTERSSSAKASPMGLIERSPSSTSIERRYVNKSGVKRNLEIDESGRRSSNDGRDFSTSDDRHGRELTLEKLDEPSQADSSFYSRTNQSNPPVIPTPPGFRTALDRPFTGSMEDDVRDNSNTRYRRSSEHGFGRMHGGNSWRAVPNWTSPVPNGFVPFPPGPGHGGFQAMMPQFASQPLFGIRAPMEVNHAGIPYHIADADRFPGHLRPLGWPNMMDGTGPAHLHGWDNSNGVFRDDTQMYGGSDWDRNRHSTNSHGWESGSETWKEQNSDSKKDLPSPACKDESVPAVVDNGLTDQTIRMSQDEHNRDEFHDKSPETKLTSVNSPEKVPLNSSPTAALEKVPDTSTPSDNTTLLSRFYLSKLDISVDLVLPELYDQCMYTLNIGKPVDAVASTELLLKNGSSARQKLAASSSKRPFPAIDNSIFQRAIGIYKKQRVKLPNGGDVDVIAVSNQVQVNESVPVPGLENRQISVSASDGTKDVLMPTLEPNKVEVLSPAKEHLEEINQTSSPMEQDHDCTHSLKTGMYSPSSGAENQEAGLGAPENDVTSDKVNSGDAEEIHSTASKDEAELPPMASKDEAELPPMASKDEAELPPTTSKDEAELPPTASKDEAELPPTAFKDEAELPPTASKDEAELPPTAFKDEAELPPTASKDEAELPPRLQEESDDMNTKATPTDSAQCADEKLGFGDTKI* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4848 1204 Coils Coil 246 266 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 812 828 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 777 791 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 450 478 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 355 648 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 433 449 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 1158 1182 - -
Lja1g4848 1204 PANTHER OS05G0595500 PROTEIN 1 318 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 747 859 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 11 59 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 1 343 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 1015 1204 - -
Lja1g4848 1204 PANTHER OS05G0595500 PROTEIN 310 1109 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 829 859 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 585 601 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 542 584 - -
Lja1g4848 1204 PANTHER LOW PROTEIN: ZINC FINGER CCCH DOMAIN PROTEIN 310 1109 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 619 643 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 1015 1045 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 493 510 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 1061 1085 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 93 343 - -
Lja1g4848 1204 MobiDBLite consensus disorder prediction 355 432 - -
Lja1g4848 1204 PANTHER LOW PROTEIN: ZINC FINGER CCCH DOMAIN PROTEIN 1 318 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4848 K22909 - gmx:100814864 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4848 1 66150028 66159867 Lja1g4848 1 66150028 66159867 ECH