Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4822 ATGGGTGCTGCAACAACGATCTGGAACCCAGAGTTAATCCACTACACATGCATTGCAAGATCAAGCACCATCCTCGCACACCATGGTTCAGGTTCAAACGACCCAAACATGGAAGCATTAGCCTCTGAATGCTTGGCTTTAACCCCACCAAACCACTCCCTCTTCTCCCACACCGTCAACCACCGCACCTACACCTTCCTCATCGACCCTCCCTTCGTCTTCTTCGCCATCTTCGATCACCGCCACACCAAATCCCAAACCCTCGCCTTCCTCCACCGCATCAGATCCTCCCTAACCGAAACCCTCCACCCCCTCAAGGATTCCTCCTCCTCGTCCTCGCCTCCGCCGCCGTTGCCACCGCTCTCGCTCCAGACGCAGTTTGATTTGATCCTCCGGGAGATTCTTCATCTGGATGACGGGAGCACCAGGTCGCCGCCGCCGGCTGTTGTTGGGGTCCCGCACGGCGAGGGGTTGAAGAAGAAGAAGAGGGTTGTGGATTCCGCTGCTGTTGCCGCCAATGGGACGGACGCCAAGGATAGGGACCTTACCACCGCCGCTGCGATGGTTGATGTGAACGACGACCTTGTTTCGCTGCCGGCGGTGGTGACGAAGGGTGTTCCCGGAGATCATCACCACCGCCACAAGGCGAAACACGTGTGGAAGAAACACGTGTGGGTAGTGCTGCTGCTTGATTTGTTTGTCTGTGCGGTTTTGTTCGTGATTTGGTTGTGGGTTTGCAGCGGGTTCAAGTGCATGACCTATTGA 765 0.5647 MGAATTIWNPELIHYTCIARSSTILAHHGSGSNDPNMEALASECLALTPPNHSLFSHTVNHRTYTFLIDPPFVFFAIFDHRHTKSQTLAFLHRIRSSLTETLHPLKDSSSSSSPPPPLPPLSLQTQFDLILREILHLDDGSTRSPPPAVVGVPHGEGLKKKKRVVDSAAVAANGTDAKDRDLTTAAAMVDVNDDLVSLPAVVTKGVPGDHHHRHKAKHVWKKHVWVVLLLDLFVCAVLFVIWLWVCSGFKCMTY* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4822 254 Gene3D Longin domain 3 139 - -
Lja1g4822 254 PANTHER PHYTOLONGIN PHYL2.2 7 253 - -
Lja1g4822 254 SUPERFAMILY SNARE-like 13 110 IPR011012 -
Lja1g4822 254 PANTHER PHYTOLONGIN PHYL1.2 7 253 IPR044783 GO:0016021
Lja1g4822 254 CDD Longin 15 96 IPR010908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4822 Lja-Chr1 65637763 65639163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g4822 15 251 Miscellaneous Gene Families AT3G54300 21.012 3.48e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4822 - - lja:Lj0g3v0249659.1 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4822 1 65637763 65639163 Lja1g4822 1 65637763 65639163 ECH